Protein Alignment Scamp and scm-1

DIOPT Version :10

• Sequence 1: NP_573023.2
• Gene: Scamp / 32470
• FlyBaseID: FBgn0040285
• Length: 343
• Species: Drosophila melanogaster
• Sequence 2: NP_490911.1
• Gene: scm-1 / 171756
• WormBaseID: WBGene00004743
• Length: 335
• Species: Caenorhabditis elegans
• Alignment Length: 352
• Identity: 132/352 - (37%)
• Similarity: 185/352 - (52%)
• Gaps: 51/352 - (14%)

  Fly    17 DNPFADP---------AIQQARRLQSGAALVSLEDYNPFEEQAKPQLQINSTNTAAVVQPLSQNI 72
            |||||||         |...|.:..||.. :..||:|||..:|      ..:|    .||.:..
 Worm     3 DNPFADPFSAPPPPPAAAAAASKPTSGGT-IETEDFNPFANRA------GGSN----AQPTTHQ- 55

  Fly    73 PPPQTSSLGASAPSTSIQITSEELQRRQEELDRKAAELDRREQQL-----------------QGN 120
               .|.|||..:..     ..:||.|:|::|:|:|.||..||::|                 |.|
 Worm    56 ---STGSLGNKSAG-----MDDELFRKQQDLERRAQELRMREEELDRRQRSAAGGNNLNTNAQNN 112

  Fly   121 VPQLNNWPPLPDNFCVKPCFYQDFEVEIPPEFQKLVKRLYYIWIFYTMTLLANVIGGLI-LLFHA 184
            .|:.:||||||....::||||||.|||||.:|||.|...||:::.|.:.|:.||:..|. ::|..
 Worm   113 APRPHNWPPLPTIIPIEPCFYQDIEVEIPVQFQKTVTFAYYVFLMYVLALVVNVLASLFYMIFAG 177

  Fly   185 GEFETFFLAIFYTMLFSPASYVCWFRPAYKAFRNDSSFNFMVFFFIYFFQTLYSIVQAVGFNKMG 249
            |.....|||.....||||.|::.||||.|||||||||||||||||:.||..:::.||.:|.:...
 Worm   178 GSIGQLFLACIQLALFSPCSFLFWFRPVYKAFRNDSSFNFMVFFFVLFFHCIFTFVQTLGLSNYA 242

  Fly   250 YCGFITAIGQFDGQASGIIVGILLLNVAFCFTAVAVANVLMITKIHSIYRSTGASMAKAQAEFTT 314
             ||:|.|:..|:   ..:.:.:|:|..|..||......|..:.|:|.:||..|.|:.||:.|||.
 Worm   243 -CGWINALDTFN---VSVPIALLMLISAITFTVALTGMVTALVKVHRLYRGAGFSIDKARQEFTN 303

  Fly   315 EFLRNQHVQEAASSAVNTAINSQFNNS 341
            ..:.:..||.|..:|...|..:.||.:
 Worm   304 GVMSDAGVQRATQAATQAAAGAAFNQA 330

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scamp	NP_573023.2	SCAMP	125..301	CDD:461193	79/176 (45%)
scm-1	NP_490911.1	SCAMP	116..290	CDD:461193	79/177 (45%)