DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scamp and Clk3

DIOPT Version :10

Sequence 1:NP_573023.2 Gene:Scamp / 32470 FlyBaseID:FBgn0040285 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_006243208.1 Gene:Clk3 / 171305 RGDID:621259 Length:640 Species:Rattus norvegicus


Alignment Length:35 Identity:11/35 - (31%)
Similarity:18/35 - (51%) Gaps:3/35 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 AEFTTEFLRNQHVQEAASSAVNTAIN-SQFNNSRY 343
            :||.|  |.|:|......|..||:|. :.|.::.:
  Rat   444 SEFET--LYNEHKSCEEKSVKNTSIRVADFGSATF 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScampNP_573023.2 SCAMP 125..301 CDD:461193
Clk3XP_006243208.1 PHA03247 29..>162 CDD:223021
PKc_CLK3 292..622 CDD:271116 11/35 (31%)
Blue background indicates that the domain is not in the aligned region.

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