DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scamp and Gm45927

DIOPT Version :10

Sequence 1:NP_573023.2 Gene:Scamp / 32470 FlyBaseID:FBgn0040285 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001296945.1 Gene:Gm45927 / 105943584 MGIID:5825564 Length:766 Species:Mus musculus


Alignment Length:340 Identity:140/340 - (41%)
Similarity:197/340 - (57%) Gaps:33/340 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PFADPAIQQARRLQSGAALVSLEDYNPFEEQAKPQLQINSTNTAAVVQP-------LSQNIPPPQ 76
            |..|||:.|.|..|..|   :|:.|||||.:..|..........|.:.|       .|:.:.|.:
Mouse   437 PLRDPAVIQHRPSQQYA---TLDVYNPFENREPPPAYEPPAPAPAPLPPPSAPSVQSSRKLSPTE 498

  Fly    77 TSSLGASAPSTSIQITSEELQRRQEELDRKAAELDRREQQLQ-----GNVPQLNNWPPLPDNFC- 135
            ..:.|:.:...|....:.||.::||||:|||.||||||::||     |...:.||||||| :|| 
Mouse   499 PRNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERELQHVALGGAGTRQNNWPPLP-SFCP 562

  Fly   136 VKPCFYQDFEVEIPPEFQKLVKRLYYIWIFYTMTLLANVIGGLI-LLFHAGEFETFFLAIFYTML 199
            |||||:||..:|||.||||.|..:||:|:..|:.||.|....|. .....|....|.|::.:.:|
Mouse   563 VKPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFFACLARFCVDTGSGSGFGLSMLWLLL 627

  Fly   200 FSPASYVCWFRPAYKAFRNDSSFNFMVFFFIYFFQTLYSIVQAVGFNKMGYCGFITAIGQFDGQA 264
            |:|.|:|||:||.|||||:||||||.|||||:|.|.::.::||:|....|:.|::||:       
Mouse   628 FTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVFFVLQAIGIPGWGFSGWVTAL------- 685

  Fly   265 SGIIVG------ILLLNVAFCFTAVAVANVLMITKIHSIYRSTGASMAKAQAEFTTEFLRNQHVQ 323
              ::||      :|:|.||..||.:||..::|:.:|||:||.||||..|||.||......|..|:
Mouse   686 --VVVGSKPAVAVLMLLVALLFTGIAVLGIVMLKRIHSLYRQTGASFQKAQQEFAAGVFSNPAVR 748

  Fly   324 EAASSAVNTAINSQF 338
            .||::|...|..:.|
Mouse   749 TAAANAAAGAAENAF 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScampNP_573023.2 SCAMP 125..301 CDD:461193 85/183 (46%)
Gm45927NP_001296945.1 Protein Kinases, catalytic domain 150..439 CDD:473864 1/1 (100%)
SCAMP 551..726 CDD:461193 85/184 (46%)

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