DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cngl and Cnga3

DIOPT Version :9

Sequence 1:NP_001245691.1 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:XP_008765264.1 Gene:Cnga3 / 85257 RGDID:70948 Length:670 Species:Rattus norvegicus


Alignment Length:709 Identity:253/709 - (35%)
Similarity:384/709 - (54%) Gaps:94/709 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 SSDSKSPSQRKSRIGDGASDPDSDWT-----RSNQRWMKLRTTV---------QISSAIQ----K 179
            ::....||.|:..:.| |:|.|.|..     ||:....:..:||         :::.|.|    .
  Rat     5 NTQCSQPSPRQLSVKD-AADRDLDQVENGLGRSHSPCEETSSTVHQGIVMETGELAGAAQSLFTS 68

  Fly   180 KPPLK---------------------REDSFLKRFSTRQIPETQETVEDTGSESASGDVDKSVKR 223
            :.|.:                     ..||||.||...::.|......:........:..:..|.
  Rat    69 QGPARVSRFIISIRAWAARHLHHEDPTPDSFLDRFHGAELKEVSSQERNAQPNPGGQEPPEGGKG 133

  Fly   224 RRRYLQKRRSVVNPDENFYFYWLMMLTVCVLYNLWTLIVRQSFPELQQSVPTFWLICDSMTDVVF 288
            |:    |...||:|..|.|:.||..:.:.|.||...|:.|..|.|||....|.||:.|...|.::
  Rat   134 RK----KDPIVVDPSSNIYYRWLTAIALPVFYNWCLLVCRACFDELQSEHLTLWLVLDYSADALY 194

  Fly   289 ILDIIVQLRTGYLEQGLMVYDDRKLACHYVHSRDFIFDMIALIPLDLLQLKMG-THPLLRFTRFF 352
            ::|::|:.|||:|||||||.|.::|..||..:..|..|:::|||.||..||:| .:|.|||.|..
  Rat   195 VVDMLVRARTGFLEQGLMVRDTKRLWKHYTKTLHFKLDILSLIPTDLAYLKLGMNYPELRFNRLL 259

  Fly   353 KVYRSVRFYYIVESRTVWPNLWRVVNLIHILLILAHWFGCFYFLLSEAEGFQGD-WVYP--YRPG 414
            :..|...|:...|:||.:||::|:.||:...||:.||..|.||.:|:..||..| ||||  .:| 
  Rat   260 RFSRLFEFFDRTETRTNYPNVFRIGNLVLYTLIIIHWNACIYFAISKFIGFGTDSWVYPNTSKP- 323

  Fly   415 DYATLTRKYLGSLYWSTLTLTTIGDLPTPETNAEYIFTIVSYLIGVFIFATIVGQVGNVITNRNA 479
            :|..|:|||:.|||||||||||||:.|.|..:.||:|.::.:|:||.|||||||.||::|:|.||
  Rat   324 EYGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVVIDFLVGVLIFATIVGNVGSMISNMNA 388

  Fly   480 NRLEFERLLDGAKTYMRHHKVPGGMKRRVLRWYDYSWSRGRIQGGGDINTALGLLPDKLKTELAL 544
            :|.||:..:|..|.||:..||...::.||:||:||.|:..:..   |....|..||||||.|:|:
  Rat   389 SRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANRKTV---DEKEVLKNLPDKLKAEIAI 450

  Fly   545 HVNLSVLKKVTIFQECQPEFLHDLVLKMKAYIFTPGDSICRKGEVAREMFIIADGILEVLSETGK 609
            :|:|..||||.|||:|:...|.:||||::..:|:|||.||:||::.|||:||.:|.|.|:::.|.
  Rat   451 NVHLDTLKKVRIFQDCEAGLLVELVLKLRPAVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGV 515

  Fly   610 V-LTTMKAGDFFGEIGILNLDGL---NKRTADVRSVGYSELFSLSREDVLAAMKDYPDAQEILQT 670
            . ...:..|.:||||.|||:.|.   |:|||::||:|||:||.||::|::..:.:||||:..|:.
  Rat   516 TQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCLSKDDLMETLTEYPDAKRALEE 580

  Fly   671 LGRKRLMEVRCVNKKYAKAQSD----KEAAAYAAAHPHHHQSHHQGQVHQSDSSENSASKKIVDK 731
            .||:.||:...::.....|::|    :|...|..:.....|:.....:     :|.|||:.   |
  Rat   581 KGRQILMKDNLIDDDLVTARADARNIEEKVEYLESSLDGLQTRFARLL-----AEYSASQM---K 637

  Fly   732 LKHDVKGFRNVLKKSRTSRKSDESLEMQPLHNTSPRGSKILLKRMSRVRSDEKDADSAE 790
            ||..:...     :|:.:|:.         |..||.            |.:.:||..|:
  Rat   638 LKQRLSQL-----ESQMTRRG---------HGFSPD------------RENSEDASKAD 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_001245691.1 Ion_trans 260..481 CDD:278921 107/224 (48%)
Ion_trans_2 382..476 CDD:285168 52/96 (54%)
Crp 550..>680 CDD:223736 62/133 (47%)
CAP_ED 556..668 CDD:237999 53/115 (46%)
Cnga3XP_008765264.1 Ion_trans 166..390 CDD:278921 107/224 (48%)
Radical_SAM 423..>476 CDD:302752 24/55 (44%)
Crp 456..>578 CDD:223736 57/121 (47%)
CAP_ED 462..578 CDD:237999 53/115 (46%)
CLZ 578..648 CDD:293134 17/82 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338736
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

Return to query results.
Submit another query.