DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cngl and CNGC13

DIOPT Version :9

Sequence 1:NP_001245691.1 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:NP_001319839.1 Gene:CNGC13 / 826427 AraportID:AT4G01010 Length:696 Species:Arabidopsis thaliana


Alignment Length:676 Identity:135/676 - (19%)
Similarity:245/676 - (36%) Gaps:170/676 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 GSESASGDVDKSVKRRRRYLQK-------------------RRSVVNPDENFYFYW--------L 246
            |...|...::..:|..||.|:|                   :::::||..:|...|        :
plant    24 GRNKARPSLNTVLKNVRRGLKKPLSFGSHNKKRDSNSSTTTQKNIINPQGSFLQNWNKIFLFASV 88

  Fly   247 MMLTVCVLYNLWTLIV--RQSFPELQQSVPTFWLICDSMTDVVFILDIIVQLRTGYLE------- 302
            :.|.:..|: .:..||  .:....|.:::.....:..:..|..:|:.|:.|.||.|:.       
plant    89 IALAIDPLF-FYIPIVDGERHCLNLHRNLEIAASVLRTFIDAFYIIHIVFQFRTAYISPSSRVFG 152

  Fly   303 QGLMVYDDRKLACHYVHSRDFIFDMIALIPL---------------------DLLQLKMGTHPLL 346
            :|.:|.|.:.:|..|:.|. ||.|:::::||                     |.|...:.|..:.
plant   153 RGELVDDPKAIAIKYLSSY-FIIDLLSILPLPQLVVLAVIPNVNKPVSLITKDYLITVIFTQYIP 216

  Fly   347 RFTRFFKVYRSVRFYYIVESRTVWPN-LWRVVNLIHILLILAHWFGCFYFLLS---------EA- 400
            |..|.:.:|..|.....:.:.|.|.. .|.    :.:.::.:|.||..::|:|         || 
plant   217 RILRIYPLYTEVTRTSGIVTETAWAGAAWN----LSLYMLASHVFGALWYLISVEREDRCWREAC 277

  Fly   401 -----------------EGFQGDWV---YPY-RPGDYATLT----------------------RK 422
                             ...:.|::   .|: .|.|....|                      :|
plant   278 EKIPEVCNFRFLYCDGNSSVRNDFLTTSCPFINPDDITNSTVFNFGIFTDALKSGIVESDDFWKK 342

  Fly   423 YLGSLYWSTLTLTTIG-DLPTPETNAEYIFTIVSYLIGVFIFATIVGQVGNVITNRNANRLEFER 486
            :....:|....|:.:| :|.|.:...|.||.:...:.|:.:||.::|.:...:.:......|...
plant   343 FFYCFWWGLRNLSALGQNLNTSKFVGEIIFAVSICISGLVLFALLIGNMQKYLESTTVREEEMRV 407

  Fly   487 LLDGAKTYMRHHKVPGGMKRRVLRWYDYSWSRGRIQGGGDINTALGLLPDKLKTELALHVNLSVL 551
            ....|:.:|.|..:|..:::|:.|:..|.|...|   |.:....|..||..|:.::..|..|.:|
plant   408 RKRDAEQWMSHRMLPDDLRKRIRRYEQYKWQETR---GVEEENLLRNLPKDLRRDIKRHFCLDLL 469

  Fly   552 KKVTIFQECQPEFLHDLVLKMKAYIFTPGDSICRKGEVAREM-FIIADGILEVLSETGKV----L 611
            |||.:|:....:.|..:..|:|..::|......|:|:...|| |::...::...:..|:.    .
plant   470 KKVPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNA 534

  Fly   612 TTMKAGDFFGEIGILNLDGLNKRTADVRSVGYSELFSLSREDVLAAMKDYPDAQEILQTLGRKRL 676
            ..:|..||.||       .|.....|.:|   |..|.:|...|.|                   |
plant   535 VYLKPSDFCGE-------DLLTWALDPQS---SSHFPISTRTVQA-------------------L 570

  Fly   677 MEVRCVNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSENSAS-----------KKIVD 730
            .||    :.:|.|..|.:..|......|..|..|..:.:........||           :|:..
plant   571 TEV----EAFALAADDLKLVASQFRRLHSKQLQHTFRFYSVQWRTWGASFIQAAWRRHCRRKLAR 631

  Fly   731 KLKHDVKGFRNVLKKSRTSRKSDESL 756
            .|..:...|||.:.|...:..|..||
plant   632 SLTEEEDRFRNAITKRERNAASSSSL 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_001245691.1 Ion_trans 260..481 CDD:278921 56/305 (18%)
Ion_trans_2 382..476 CDD:285168 25/147 (17%)
Crp 550..>680 CDD:223736 30/134 (22%)
CAP_ED 556..668 CDD:237999 24/116 (21%)
CNGC13NP_001319839.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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