DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cngl and CNGC15

DIOPT Version :9

Sequence 1:NP_001245691.1 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:NP_180393.1 Gene:CNGC15 / 817372 AraportID:AT2G28260 Length:678 Species:Arabidopsis thaliana


Alignment Length:575 Identity:121/575 - (21%)
Similarity:219/575 - (38%) Gaps:128/575 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 DENFYFYWLMMLTVCVLYNLWTLIVRQSFPELQQSVPTFWLICDSMTDVVFILDIIVQLRTGYLE 302
            |..|:|..:|....|:     |:.||         :.....:..|:.|..:|..|:::.||.|:.
plant    94 DPLFFFLPVMRNEACI-----TIGVR---------LEVVLTLIRSLADAFYIAQILIRFRTAYIA 144

  Fly   303 -------QGLMVYDDRKLACHYVHSRDFIFDMIALIPLDLLQL-----------KMGTHPLLRF- 348
                   :|.:|.|.||:|..|:| :.|...::|.:||..:.:           ...|..:||| 
plant   145 PPSRVFGRGELVIDSRKIAWRYLH-KSFWIHLVAALPLPQVLIWIIIPNLRGSPMTNTKNVLRFI 208

  Fly   349 ------TRFFKVY---RSVRFYYIVESRTVWPNLWRVVNLIHILLILAHWFG-CFYFLLSEAEGF 403
                  .|.|.::   |.:.....|.:.|.|..  ...||: :.::.:|..| |:|.|..|.:  
plant   209 IIFQYVPRMFLIFPLSRQIIKATGVVTETAWAG--AAYNLM-LYMLASHVLGACWYLLAVERQ-- 268

  Fly   404 QGDW---------VYPYR--------------------------P----------GDYATLT--- 420
            :..|         :..||                          |          ||..|.|   
plant   269 EACWRHACNIEKQICQYRFFECRRLEDPQRNSWFEWSNITTICKPASKFYEFGIFGDAVTSTVTS 333

  Fly   421 ----RKYLGSLYWSTLTLTTIG-DLPTPETNAEYIFTIVSYLIGVFIFATIVGQVGNVITNRNAN 480
                .||...|:|....|:::| :|.|.....|.:|.|:...:|:.:||.::|.:...:.:....
plant   334 SKFINKYFYCLWWGLKNLSSLGQNLATSTYAGEILFAIIIATLGLVLFALLIGNMQTYLQSTTMR 398

  Fly   481 RLEFERLLDGAKTYMRHHKVPGGMKRRVLRWYDYSWSRGRIQGGGDINTALGLLPDKLKTELALH 545
            ..|:.......:.:|.|.::|..:::.|.::..|.|...|   |.|....|..||..|:.::..|
plant   399 LEEWRIRRTDTEQWMHHRQLPPELRQAVRKYDQYKWLATR---GVDEEALLISLPLDLRRDIKRH 460

  Fly   546 VNLSVLKKVTIFQECQPEFLHDLVLKMKAYIFTPGDSICRKGEVAREMFIIADGILEVLSETGKV 610
            :...::::|.:|.:.....|..:..::|..:.|.|..:.|:|:...||..|..|.|:..:..|..
plant   461 LCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGR 525

  Fly   611 LTTMKA-----GDFFGEIGILN--LDG-----LNKRTADVRSVGYSELFSLSREDVLAAMKDYPD 663
            .....:     |||.|| .:|.  ||.     |...|..|:::...|.|:|..||:         
plant   526 TGFFNSCLIGPGDFCGE-ELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAEDL--------- 580

  Fly   664 AQEILQTLGRKRLMEVRCVNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSD 718
             |.:.....|....::|...:.|:.......|....||...|.:..::.::...:
plant   581 -QFVASQFRRLHTKQLRHKFRFYSHQWRTWAACFIQAAWRRHRKRKYKTELRAKE 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_001245691.1 Ion_trans 260..481 CDD:278921 62/302 (21%)
Ion_trans_2 382..476 CDD:285168 29/147 (20%)
Crp 550..>680 CDD:223736 32/141 (23%)
CAP_ED 556..668 CDD:237999 30/123 (24%)
CNGC15NP_180393.1 PLN03192 127..>489 CDD:215625 77/370 (21%)
CAP_ED 471..602 CDD:237999 32/141 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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