DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cngl and kcnh2a

DIOPT Version :9

Sequence 1:NP_001245691.1 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:XP_021336554.1 Gene:kcnh2a / 563802 ZFINID:ZDB-GENE-070912-699 Length:1254 Species:Danio rerio


Alignment Length:1092 Identity:235/1092 - (21%)
Similarity:424/1092 - (38%) Gaps:261/1092 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 SAAHSSDSKS-----PSQRKSRIGDGASDPDSDWTRSNQRWMKLRTTVQISSAIQKKPPLKR--E 186
            |.|||...:|     ||         .|..|.:|.|      ||......:.|:.:|..|:.  .
Zfish   268 SMAHSRSCESLCGMRPS---------PSTNDFNWDR------KLPVRPSSTGAMHRKASLQNATS 317

  Fly   187 DSFLKRF-STRQIPETQETVEDTGSES----ASGDVD-----KSVKRRRRYLQKRRSVVN----- 236
            ||.|.|. |:.:..:....:.|...::    .:|::|     |.:.|.....:|...|::     
Zfish   318 DSDLIRLRSSGRGTQISHNLIDMKPDALIAVPTGEIDIIAPCKLIDRTHNVTEKVTQVLSLGADV 382

  Fly   237 -PD----------------ENFYFYWLMMLTVCVLYN-LWT------LIVRQSFPELQQ---SVP 274
             |:                ..|...|..::.:.|:|. ::|      |:..:....:|:   |..
Zfish   383 LPEYKLQAPRIHKWTILHYSPFKAVWDWVILLLVIYTAIFTPYSAAFLLSDEEEEVIQRCGYSCS 447

  Fly   275 TFWLICDSMTDVVFILDIIVQLRTGYLEQG-LMVYDDRKLACHYVHSRDFIFDMIALIPLDLLQL 338
            |..:: |.:.|::|::||::..||.|:... .:|....::|.||.... |:.||:|.||.|||..
Zfish   448 TLNVV-DLIVDIMFVVDIVINFRTTYVNSNDEVVSQPGRIAVHYFKGW-FLIDMVAAIPFDLLIY 510

  Fly   339 K-----------MGTHPLLRFTRFFKVYRSVRFYYIVESRTVWPNLWRVVNLIHILLILAHWFGC 392
            :           :|.....|..|..:|.|.:..|....:..::       .|:....::|||..|
Zfish   511 RSEEETTTSTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLF-------LLMCTFALIAHWLAC 568

  Fly   393 FYFLLSEAE----------GFQGDWV-YPYRP---GDYATLTRKYLGSLYWSTLTLTTIG-DLPT 442
            .::.:...|          ...||.: .||..   |...::..||:.:||::..:||::| ...:
Zfish   569 IWYAIGNVERSGPSRIGWLNSLGDQLGKPYNSSVRGSGPSIKDKYVTALYFTFSSLTSVGFGNVS 633

  Fly   443 PETNAEYIFTIVSYLIGVFIFATIVGQVGNVITNRNANRLEFERLLDGAKTYMRHHKVPGGMKRR 507
            |.||:|.||:|...|||..::|:|.|.|..:|....:....:...:...:.::|.|::|..:::|
Zfish   634 PNTNSEKIFSICVMLIGALMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQR 698

  Fly   508 VLRWYDYSWSRGRIQGGGDINTALGLLPDKLKTELALHVNLSVLKKVTIFQECQPEFLHDLVLKM 572
            :..::.::||   ...|.|:|..|...|:.|:.::.||:|.::|:....|:......|..|.:|.
Zfish   699 LEEYFQHAWS---YTNGIDMNAVLKGFPECLQADICLHLNRTLLQSCKAFKGSSKGCLRALAMKF 760

  Fly   573 KAYIFTPGDSICRKGEVAREMFIIADGILEVLSETGKVLTTMKAGDFFGEIGILNLDGLNKRTAD 637
            |.....|||::...|:|...::.|:.|.:|:| :...|:..:...|.||| .|.:.....|.:||
Zfish   761 KTTHAPPGDTLVHAGDVISALYFISRGSIEIL-KGDVVVAILGKNDIFGE-PINSYARPGKSSAD 823

  Fly   638 VRSVGYSELFSLSREDVLAAMKDYPDAQEILQTLGRKRLMEVRCVNKKYAKAQSDKEAAAYAAAH 702
            ||::.|.:|..:.|:|||..::.||:..:...: ..:....:|..|.|.....||.:        
Zfish   824 VRALTYCDLHKIHRDDVLEVLEMYPEFSDYFWS-NLEITFNLRDTNTKAGSMSSDPD-------- 879

  Fly   703 PHHHQSHHQGQVHQS-------DSSENSASKKIVDKLKHDVKGFRNVLKKSRTSRKSDESLEMQP 760
                .|.:.|..|.:       .|..||.|:...::.:..:   ..:..:::||.|..|:     
Zfish   880 ----DSDNGGLDHHTRRAKLFFQSKRNSISRADTERTEDRL---NRMTFRTQTSGKQHEN----- 932

  Fly   761 LHNTSPRGSKILLKRMSRVRSDEKD--------ADSAEA---------KDELHDKTPS--PIGAG 806
             ..|:.|.|.|...:.|   |||::        .|.:::         :|:.|:.:.|  .:...
Zfish   933 -RQTAHRSSDIFASQSS---SDEEEETQRPSVMVDCSQSHINSVSNANRDKDHNSSNSFNALSGA 993

  Fly   807 LPLLQRLRLLKEKQDR-----EERAVKSTPPQKSPPHSHVTCTLSPQESIQEEP----------- 855
            ...:..:..|.....|     |..:...:.|..|.|.:.|...::..:..:.|.           
Zfish   994 FSGVSNIFSLWGDSSRGHHYQEVPSHSMSFPSSSVPSNTVLHNVTYGQCSEVENRLEMMHRQLYR 1058

  Fly   856 -EREFSEGFPLIQRLQQLKIKNEPQANAA------------EPGVVMV--------NTPPNISSK 899
             |:..|:....|.:|.|.::...|.|.::            :||..:|        .||..:|..
Zfish  1059 LEKRMSKDIGAIMQLLQRQMVQVPPAYSSVTSPTEASPIPPKPGQKLVQPVNPLETETPSILSEI 1123

  Fly   900 IDSH-FAASQAGASHPGPNGGAIGISAPGQSLTVAQIKPIMKVSFKQKIQQMQGGGGGASSSP-G 962
            :|.| ||.|...||               :||:.|           .::|.:.......|.:| |
Zfish  1124 LDPHDFADSPIKAS---------------ESLSGA-----------MELQLLDCSSQPPSENPSG 1162

  Fly   963 PSTGAIAKKEPPKSLALVAKHA-TSEDPVAAAGLGLGSGSSSGIATISKRVVKPQSHRMATPLQS 1026
            ...|..::.        |:.|. |:.||.|...|             .:..:..|:|....    
Zfish  1163 AYMGRWSRS--------VSHHTNTTGDPTAHIHL-------------QQTAIADQAHYSFL---- 1202

  Fly  1027 DTDTDGTPIKPWS--KLKLATLMSSSYTSL-------TNCS-----PDDLAS 1064
            |.:..||..:|.:  .|.|.|...|...||       .:||     |.|..|
Zfish  1203 DAEPIGTLRQPQAVQSLHLETSECSRRQSLPVKHQVEDDCSMQKRHPSDPGS 1254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_001245691.1 Ion_trans 260..481 CDD:278921 64/250 (26%)
Ion_trans_2 382..476 CDD:285168 32/108 (30%)
Crp 550..>680 CDD:223736 34/129 (26%)
CAP_ED 556..668 CDD:237999 33/111 (30%)
kcnh2aXP_021336554.1 PAS_9 29..130 CDD:315989
Ion_trans 407..670 CDD:306908 68/271 (25%)
CAP_ED 744..855 CDD:237999 33/112 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578352
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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