DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cngl and LOC562466

DIOPT Version :9

Sequence 1:NP_001245691.1 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:XP_009295831.2 Gene:LOC562466 / 562466 -ID:- Length:801 Species:Danio rerio


Alignment Length:571 Identity:159/571 - (27%)
Similarity:276/571 - (48%) Gaps:78/571 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 SSAIQKKPPLK---REDSFLKRFSTRQIPETQETV-----EDTGSESASGDVDKSVKRRRRYLQK 230
            :|:.::.||:.   |:|.:.|....|:..|.:|.:     :....|.|....:::.|:::...:|
Zfish   185 ASSPERSPPVTPVLRKDDYYKLVEERKRQEEEERIRKEEEKKRKEEEAKKKKEEAEKKKKEEEEK 249

  Fly   231 RRS-------------VVNPDE------------NF----------------------------- 241
            ::.             |...|:            ||                             
Zfish   250 KKKEEEEKKKEQAGKPVEKKDDKTDEKKSIFSKVNFTCVDFVLKPFEMRMDNRIGKSIDPFTDRR 314

  Fly   242 YFYWLMMLTVCVLYNLWTLIVRQSFPELQQSVPTFWLICDSMTDVVFILDII-VQLRTGYLEQGL 305
            |..||.|:|:...||||.:.||.:||.....|...|...|.:.|.::|.|:| .|.|..:.:.|.
Zfish   315 YITWLSMVTIAFNYNLWFVPVRMAFPYHSPEVVPLWFTLDIIADFIYIFDMIFFQPRLQFSKGGD 379

  Fly   306 MVYDDRKLACHYVHSRDFIFDMIALIPLDLLQLKMGTHPLLRFTRFFKVYRSVRFYYIVESRTVW 370
            ::||...:...|..|..|..|:||::|:|||.:..|.:.:.|..|..||.....|...:|.....
Zfish   380 IIYDREVIKKKYRESGRFQNDVIAVLPIDLLYIPFGFNSVFRLNRLMKVESFFEFSDRLEGLLTR 444

  Fly   371 PNLWRVVNLIHILLILAHWFGCFYFLLSEAEGF-QGDWVYPYRPGDYATLTRKYLGSLYWSTLTL 434
            ..:|||:..|..||.:.|...|.|::.|.::|. ...|||..:..       .||...:::..:|
Zfish   445 AYIWRVIRTIGYLLFILHLNACLYYVASVSQGIGSTKWVYSGKGS-------AYLSCFFYAEKSL 502

  Fly   435 TTIGDLPTPETNAEYIFTIVSYLIGVFIFATIVGQVGNVITNRNANRLEFERLLDGAKTYMRHHK 499
            ..|.:||.|||....||.:.:|.:|....:.|:.|:.:||....|.:..|...:|....||..:.
Zfish   503 LMIAELPFPETMFGQIFQMTNYFVGALFLSIILAQMRDVIGAATAGQTYFRASMDACVAYMVTNH 567

  Fly   500 VPGGMKRRVLRWYDYSWSRGRIQGGGDINTALGLLPDKLKTELALHVNLSVLKKVTIFQECQPEF 564
            :|..::.||..||:|:|..   ||..|.:..||.:|..::|.:|:.:||:..:|:.:|:.|..:.
Zfish   568 IPKMVQSRVRTWYNYTWDS---QGMLDESELLGQMPLVMRTAIAVDINLATFQKIELFKGCDNQM 629

  Fly   565 LHDLVLKMKAYIFTPGDSICRKGEVAREMFIIADGILEVLS--ETGKVLTTMKAGDFFGEIGIL- 626
            |.|::|::|:.::.|||.:.:||::.:||:||..|.::|:.  :...|..|:|||..||||.:| 
Zfish   630 LVDMLLRLKSIVYLPGDFVVKKGDIGKEMYIIKAGEVQVIGGPDNKIVFVTLKAGCVFGEISLLQ 694

  Fly   627 -NLDGLNKRTADVRSVGYSELFSLSREDVLAAMKDYPDAQEILQTLGRKRL 676
             :.:|.|:|||:|.:.|::.||.|.::|:...:..||::|::|...|||.|
Zfish   695 SSANGGNRRTANVAAHGFANLFVLDKKDLNDILIHYPESQKVLARKGRKLL 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_001245691.1 Ion_trans 260..481 CDD:278921 65/222 (29%)
Ion_trans_2 382..476 CDD:285168 27/94 (29%)
Crp 550..>680 CDD:223736 47/131 (36%)
CAP_ED 556..668 CDD:237999 41/115 (36%)
LOC562466XP_009295831.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578303
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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