DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cngl and hcn4

DIOPT Version :9

Sequence 1:NP_001245691.1 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:XP_686078.4 Gene:hcn4 / 557843 ZFINID:ZDB-GENE-050420-360 Length:1140 Species:Danio rerio


Alignment Length:1284 Identity:298/1284 - (23%)
Similarity:490/1284 - (38%) Gaps:364/1284 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RAHASAHKKILSSGYHSQLNYGSTGAAAASSS-------------SSGATATGLYTMEAHEHEAG 60
            |.|:|..|::.|...|........|.|..|..             :||...:|  .....|.:.|
Zfish     3 RLHSSMRKRLYSLPQHIGQKASIMGDAEDSDKDTRRKSIRMKPLPTSGEIKSG--ESAIMETDIG 65

  Fly    61 KFVKD----------------VARQVHDCNSD--------TD-VISPTGTSISGGGGGGGAGGAG 100
            :.||.                .:|.|||  ||        || .::|:..|..|..|||...|| 
Zfish    66 RPVKTSSNGDCRRFRGSLSSITSRHVHD--SDVAEERRLITDGEVTPSEESPPGAAGGGAEPGA- 127

  Fly   101 GSGGAGGHSDGGYHKRHHHKMVRDDDNNSAAHSSDSKSPSQRKSRIG-DGASD--PDSDWTRSNQ 162
            .|||.||....|                |:.|..   .|.|:...|. :|...  ||.:  |..|
Zfish   128 QSGGGGGEEAAG----------------SSQHQG---IPDQQAGFIKLEGIEQILPDDE--RYYQ 171

  Fly   163 RWMKLRTTVQISSAIQKKPPLKREDSFLKRFSTRQIPETQETVEDTGSESASGDVDKSVKRRRRY 227
            .....|   |..:.:|..         :.:||.|..          |||       |:|:|.:..
Zfish   172 AGFMHR---QFGAMLQPG---------VNKFSLRMF----------GSE-------KAVEREQER 207

  Fly   228 LQKRRS-VVNPDENFYFYWLMMLTVCVLYNLWTLIVRQSFPELQQSVPTFWLICDSMTDVVFILD 291
            ::.... :::|..:|.|||.:.:.:.::.||..:.|..:|.:.:.:.|  |::.:.::|..|::|
Zfish   208 VKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDEHTPP--WIVFNVVSDTFFLMD 270

  Fly   292 IIVQLRTGYLEQ--GLMVYDDRKLACHYVHSRDFIFDMIALIPLDLLQLKMGTH----------- 343
            :::..|||.:::  ..::.|.:::...|:.|. |:.|.|:.||:|.:.|.:.|.           
Zfish   271 LVLNFRTGIVKEDNAEIILDPQQIKIKYLRSW-FVVDFISSIPVDYIFLIVETRIDSDFYKTARA 334

  Fly   344 -PLLRFTRFFKVYRSVRFYYIVESRTVWPNLW-----------RVVNLIHILLILAHWFGCFYFL 396
             .::|||:...:.|.:|...::.....|..::           |:||||.::|:|.||.||..||
Zfish   335 LRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFL 399

  Fly   397 LSEAEGFQGD-WVYPYRPGDYATLTRKYLGSLYWSTLTLTTIG-DLPTPETNAEYIFTIVSYLIG 459
            :...:.|..| ||...:..: .|..::|..:|:.:...:..|| .:..|....:...||:|.::|
Zfish   400 VPMLQDFPADCWVAKNKMVN-DTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVG 463

  Fly   460 VFIFATIVGQVGNVITNRNANRLEFERLLDGAKTYMRHHKVPGGMKRRVLRWYDYSWSRGRIQGG 524
            ...:|..||....:|.:.:::|.:::......:.||..||:|..|::|:..:|::     |.||.
Zfish   464 ATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEH-----RYQGK 523

  Fly   525 -GDINTALGLLPDKLKTELALHVNLSVLKKVT---IFQECQPEFLHDLVLKMKAYIFTPGDSICR 585
             .|..:.||.|.:.|:.|:   :|.:..|.|.   :|....|.|:..::.|::..:|.|||.|.|
Zfish   524 MFDEESILGELNEPLREEI---INFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIR 585

  Fly   586 KGEVAREMFIIADGILEVLSETGKVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYSELFSLS 650
            :|.:.::|:.|..|::.||:: |...|.:..|.:||||.:|.   ..:|||.||:..|..|:|||
Zfish   586 EGTIGKKMYFIQHGVVSVLTK-GNKETKLSDGSYFGEICLLT---RGRRTASVRADTYCRLYSLS 646

  Fly   651 REDVLAAMKDYPDAQEILQTLGRKRLMEVRCVNKKYA----KAQSD--------KEAAAYAAAHP 703
            .::....:::||..:...:|:...||..   :.||.:    |.|.|        :|:........
Zfish   647 VDNFNEVLEEYPMMRRAFETVALDRLDR---IGKKNSILQHKVQHDLNSGVLNYQESEIIQQIVQ 708

  Fly   704 HHHQSHHQGQVHQSDS--------------------SENSASKKIVDKLKH-------------D 735
            |.....|...:.||.|                    ...:|:..:...|.|             .
Zfish   709 HDRDMAHCANLLQSPSPPAPPSPTPVIWAPLIQAPLQAAAATTSVAIALTHHPHLPATLFRPPVS 773

  Fly   736 VKGFRNV----LKKSRTSRKSDESLEMQPLHNTSPRGSKILLKRMSRVRSDEKDADSAEAKDELH 796
            :.|.||.    ||:.:|......|....|  :|||                          .:||
Zfish   774 LLGSRNEPPSRLKRFQTVAPRTGSTTDSP--STSP--------------------------SKLH 810

  Fly   797 DKTPSPIGAGLPLLQRLRLLKEKQDREERAVKSTP---------------PQKSPPHSHVTCTLS 846
            .      |...|||..|.       .:..:|..||               |..||..|  |..|.
Zfish   811 S------GVDTPLLASLH-------TQHSSVTITPSATTNQPVSFRSFSSPSASPTLS--TAQLH 860

  Fly   847 PQESIQEEPEREFSEGFPLIQRLQQLKIKNEPQANAAEPGVVMV---NT---------------- 892
            ||.. |::|...     ||..|||        .|.|..||::..   ||                
Zfish   861 PQPR-QKQPSTP-----PLSARLQ--------AAGAHPPGILTTASSNTSALSAGLSTHSPTHSY 911

  Fly   893 PPNISSKIDSHFAASQAGAS-----HPGPNGGAIGI--SAPGQSLTVAQIKP------IMKVSFK 944
            ||....:..|...||..|.|     |..|.|..|.|  .|| :|.|.:|.:|      .::.|..
Zfish   912 PPPKHPQTGSLQFASGGGKSGLTLFHSPPPGSPISIHSQAP-ESSTSSQTQPSFSSYLALERSAL 975

  Fly   945 QKIQQMQGGGGGASSSP------------GPSTGAIAKKEPPKSLA----------------LVA 981
            ..|.|.    |.|::||            .|.||...:...|.|.|                |..
Zfish   976 ASIAQY----GSANASPSYTPLALSPTVQSPVTGRTFQYSDPSSAAGSHTSLLLPQSSCPGQLPG 1036

  Fly   982 KHATSED-PV------------AAAGLGL-GSGSSSG-------IATISKRVVKPQSHRMATPLQ 1025
            .|::..| |:            :...||: |:|.||.       ..|::.:.....|..|::|:|
Zfish  1037 HHSSGTDSPLGRFYEDLNILSSSHPSLGVEGAGQSSPGYLSPYLSPTLTPKPCSSVSGHMSSPVQ 1101

  Fly  1026 SDTDTDGTPIKPWSKLKLATLMSSSYTSLTNCSPDDLASPLKNYSLSNI 1074
            :         .|..:.:..::.:|...||...|..|| .||::...||:
Zfish  1102 T---------SPGPRGQALSVGTSPALSLPRTSDGDL-EPLRSKLPSNL 1140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_001245691.1 Ion_trans 260..481 CDD:278921 58/247 (23%)
Ion_trans_2 382..476 CDD:285168 26/95 (27%)
Crp 550..>680 CDD:223736 41/132 (31%)
CAP_ED 556..668 CDD:237999 36/111 (32%)
hcn4XP_686078.4 Ion_trans_N 179..221 CDD:285597 11/67 (16%)
Ion_trans 241..486 CDD:278921 58/248 (23%)
Crp 550..>685 CDD:223736 42/141 (30%)
CAP_ED 556..664 CDD:237999 36/111 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578311
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.