DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cngl and kcnh5a

DIOPT Version :9

Sequence 1:NP_001245691.1 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:NP_001263209.1 Gene:kcnh5a / 556304 ZFINID:ZDB-GENE-061106-2 Length:1093 Species:Danio rerio


Alignment Length:1052 Identity:215/1052 - (20%)
Similarity:375/1052 - (35%) Gaps:328/1052 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 KPPLKREDSFLKRFS-----TRQIPETQETVEDTGSESASGDVDKSVKRRRRYLQ---------K 230
            |.|:  ||...:.::     ||.:..::.||:.....:.: :|.....|....||         |
Zfish   135 KQPI--EDETTRGWTKFARLTRALTNSRGTVQQLTPMNKT-EVSHKHSRLAEALQLGSDILPQYK 196

  Fly   231 RRSVVNPDENFYFY--------WLMML-----TVCVLYNLWTLIVRQSFPELQQSVPTFWLICDS 282
            :.:...|......|        |::::     .:.|.||:       ||...|.::  .||:.||
Zfish   197 QEAPKTPPHIILHYCTFKTTWDWVILILTFYTAIMVPYNV-------SFKTKQNNL--VWLVLDS 252

  Fly   283 MTDVVFILDIIVQLRTGYLEQGLMVYDDRKL-ACHYVHSRDFIFDMIALIPLDLL---------- 336
            :.||:|::||::...|.::..|..|..|.|| ..:|:.:. |:.|:::.:|.|::          
Zfish   253 VVDVIFLVDIVLNFHTTFVGPGGEVISDPKLIRMNYLKTW-FVIDLLSCLPYDIINAFENVDEDT 316

  Fly   337 --------QLKMGTHPLLRFTR--------------FFKVYRSVRF--------YYIVESRTVWP 371
                    .|....|.....||              ..||.|.:|.        :|:.....|  
Zfish   317 FVDSSAVGHLPSAGHSPRNATRAEDSVLPGLSSLFSSLKVVRLLRLGRVARKLDHYLEYGAAV-- 379

  Fly   372 NLWRVVNLIHILLILAHWFGCFYFLLSEAEGFQ--------GDWVY--------PYR-------- 412
                :|.|:.:..::|||..|.::.:.:.|...        ..|:|        |||        
Zfish   380 ----LVLLVCVFGLVAHWLACIWYSIGDYEVIDEATNSLKTDSWLYQLAISIGTPYRYNASGSGH 440

  Fly   413 ----PGDYATLTRKYLGSLYWSTLTLTTIG-DLPTPETNAEYIFTIVSYLIGVFIFATIVGQVGN 472
                |..: ||   |:.|||::..:||||| ....|.|:.|.||::...::|..::|||.|.|..
Zfish   441 WEGGPSKH-TL---YISSLYFTMTSLTTIGFGNIAPTTDGEKIFSVAMMMVGSLLYATIFGNVTT 501

  Fly   473 VITNRNANRLEFERLLDGAKTYMRHHKVPGGMKRRVLRWYDYSWSRGRIQGGGDINTALGLLPDK 537
            :......|...:..:|:..:.:::.::||.|:..||:   ||..|...:..|.|....|.:.|..
Zfish   502 IFQQMYTNTNRYHEMLNNVRDFLKLYQVPKGLSERVM---DYIVSTWAMTKGIDTEKVLSICPKD 563

  Fly   538 LKTELALHVNLSVLKKVTIFQECQPEFLHDLVLKMKAYIFTPGDSICRKGEVAREMFIIADGILE 602
            ::.::.:|:|..|..:...|:......|..|.::.:.....|||.|...||....:..:..|.||
Zfish   564 MRADICVHLNRQVFNEHPAFRLASDGCLRSLAVEFQTTHCAPGDLIFHAGESVDTLCFVVSGSLE 628

  Fly   603 VLSETGKVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYSELFSLSREDVLAAMKDYPD---- 663
            |:.: .:|:..:..||.||:: ......|....|:||::.|.:|..:.|:.:|..::.|..    
Zfish   629 VIQD-DEVIAILGKGDVFGDV-FWKESSLAHACANVRALTYCDLHVIRRDALLKVLEFYTAFANS 691

  Fly   664 -AQEILQTLG-RKRLMEVRCVNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSENSASK 726
             ::.::.|.. |||:     |.:|.|..:.::|           .:.|.:.:|..|...::.. :
Zfish   692 FSRNLILTCNLRKRI-----VFRKIADVKKEEE-----------ERRHQKNEVTLSIPVDHPV-R 739

  Fly   727 KIVDKLKHDVKGFRNVLKKSRTSRKSDESLE---MQPLHNTSPRGSKILLKRMSRVRSDEKDADS 788
            |:..|.|..        |:.||...|...||   .|..|:..|                      
Zfish   740 KLFQKFKQQ--------KEMRTQGPSQYDLERNQFQVEHHLHP---------------------- 774

  Fly   789 AEAKDELHDKTPSPIGAGLPLLQRLRLLKEKQDREERAVKSTPPQKSPPHSHV------------ 841
              ...:||.:...|...|                          ..|.||.||            
Zfish   775 --LSHQLHQQQYQPQYQG--------------------------HHSLPHQHVAPMQNGAPGSGN 811

  Fly   842 ----TC--TLSPQESIQ------EEPEREFSEGFPLIQRLQQLKIKNEPQANAAEPGVVMVNTPP 894
                :|  |:|....||      :..|...|||.      :.:::|  |...|.:...:.|.:| 
Zfish   812 GNGGSCVVTVSQITPIQSALAYAQTEETNMSEGH------EAMELK--PNFGAEDSNCLKVTSP- 867

  Fly   895 NISSKIDSHFAASQAGAS------HPGPNGGAIGISAPGQSLTVAQ------------IKPIMKV 941
                      ...:||..      |...:|     |:|...|.:.:            .:|:..:
Zfish   868 ----------VKPRAGKGRGWMRFHNIASG-----SSPMLPLELEKQPQQKEEEWGDVSQPLNAI 917

  Fly   942 SFKQKIQQMQGGGGGASSSPGPSTGAIAKKEPPKSLALVAKHATSEDPVAAAGLGLGSGSSSGIA 1006
            |..:|.|:.:|||   |...|||..:.:.:|..::.||   |.|             ....|||.
Zfish   918 SEDRKGQEAEGGG---SQKEGPSGNSNSSEETDENSAL---HKT-------------DSCDSGIT 963

  Fly  1007 TISKRVVKPQSHRMATPLQSDTDTDGTPIKPWSKLKLATLMSSSYTSLTNCSPDDLASP------ 1065
            ....|:                |..|....|:.:..:..            ||.|..||      
Zfish   964 KSDLRI----------------DRVGDSRSPYDRCSMER------------SPFDQPSPGVVDVT 1000

  Fly  1066 LKNYSLSNIPQQ 1077
            |:......:|.|
Zfish  1001 LRGIHFQPVPDQ 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_001245691.1 Ion_trans 260..481 CDD:278921 68/290 (23%)
Ion_trans_2 382..476 CDD:285168 33/122 (27%)
Crp 550..>680 CDD:223736 32/135 (24%)
CAP_ED 556..668 CDD:237999 27/116 (23%)
kcnh5aNP_001263209.1 PAS 40..131 CDD:238075
PAS_3 40..127 CDD:285623
Ion_trans 232..511 CDD:278921 72/298 (24%)
Ion_trans_2 <451..505 CDD:285168 20/53 (38%)
Crp 576..>734 CDD:223736 39/175 (22%)
CAP_ED 582..692 CDD:237999 27/111 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578335
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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