DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cngl and che-6

DIOPT Version :9

Sequence 1:NP_001245691.1 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:NP_001343628.1 Gene:che-6 / 182823 WormBaseID:WBGene00000487 Length:655 Species:Caenorhabditis elegans


Alignment Length:506 Identity:144/506 - (28%)
Similarity:253/506 - (50%) Gaps:79/506 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 DENFYFYWLMMLTVCVLYNLWTLIVRQSFPELQQSVPTFWLICDSMTDVVFILDIIVQLRTGYLE 302
            :..:|:.|...::..|:||::.::: ..|.:::......|:..:.|.|:|||:||.||.|..||.
 Worm    64 NSKYYYIWSFFVSFGVMYNMFAMVI-FIFADIKTQYFWNWIFLNVMFDMVFIVDIFVQSRLTYLH 127

  Fly   303 QGLMVYDDRKLACHYVHSR-DFIFDMIALIPLDLLQLKMGTHPLLRFTRFFKVYRSVRFYYIVES 366
            :|..|.:.:||..:|...: ....|:..|:|||.|.....:..|:|..|..||.|.:.|....:.
 Worm   128 EGEEVKNTKKLRKNYFFQKLKVANDIFCLLPLDFLLFFDDSMSLVRTIRIVKVIRLMDFVQRTQQ 192

  Fly   367 RTVWPNLWRVVNLIHILLILAHWFGCFYFLLSEAEGF---------------------------- 403
            :|.:|..::::.|....::|.||..|.|||.|..||.                            
 Worm   193 QTTFPRAFKIILLAVSCIVLFHWNACLYFLFSLYEGITEESQTEFGFSYYKVFEPVFPTCQAYYD 257

  Fly   404 QGDWV-----------------------------YPYRPGDYATLTRKYLGSLYWSTLTLTTIGD 439
            :..|.                             |.:..|::   :|:|..|:|||.||:||.|.
 Worm   258 ENCWFGEDIDHTLDLDDVRDSYKKEMAEYWKDKHYRWTTGNF---SREYSMSIYWSALTITTCGQ 319

  Fly   440 LPTPETNAEYIFTIVSYLIGVFIFATIVGQVGNVITNRNANRLEFERLLDGAKTYMRHHKVPGGM 504
            .|.|.|:::....:...||||.:||||:|.||:|:|..:....||.:::||.|.||::.:|...:
 Worm   320 QPWPSTSSQNSLEVFDTLIGVLVFATIIGSVGSVVTQMSQTVNEFRQMMDGIKFYMKYREVNSAI 384

  Fly   505 KRRVLRWYDYSWSRGRIQGGGDINTALGLLPDKLKTELALHVNLSVLKKVTIFQECQPEFLHDLV 569
            :.|.|..:.|..:..::.   |....|.|||.:|:..:|.::::..|:.:.||..|:..|:|::|
 Worm   385 QERALSCFMYLMAHNQLD---DEEGILSLLPPRLQANIAANLHMETLQNIQIFALCESRFMHEVV 446

  Fly   570 LKMKAYIFTPGDSICRKGEVAREMFIIADGILEVL-SETGKVLTTMKAGDFFGEIGIL----NLD 629
            |.:|..:|:|.|.:|||.|.|:|:||:..|.|.|: .:||:.:..:..|..|||:.|:    ||.
 Worm   447 LLVKQQVFSPNDYLCRKNEKAKELFIVKKGKLRVIDDDTGEEMGELTEGATFGELSIVYVKGNLL 511

  Fly   630 GLNKRTADVRSVGYSELFSLSREDVLAAMKDYP--------DAQEILQTLG 672
            | .:|...::|||:|:::.|.|:||...::::|        :|:.:|.:.|
 Worm   512 G-TRRCCSLQSVGFSDIYVLYRDDVSRLLQEFPQEYKTIVMNARNLLHSRG 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_001245691.1 Ion_trans 260..481 CDD:278921 75/278 (27%)
Ion_trans_2 382..476 CDD:285168 39/150 (26%)
Crp 550..>680 CDD:223736 46/136 (34%)
CAP_ED 556..668 CDD:237999 43/124 (35%)
che-6NP_001343628.1 Ion_trans 68..>245 CDD:366146 50/177 (28%)
PLN03192 <303..>581 CDD:215625 90/263 (34%)
CAP_ED 433..544 CDD:237999 41/111 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158450
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0500
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.750

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