DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cngl and Kcnh7

DIOPT Version :9

Sequence 1:NP_001245691.1 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:XP_006234331.1 Gene:Kcnh7 / 170739 RGDID:621112 Length:1203 Species:Rattus norvegicus


Alignment Length:1097 Identity:236/1097 - (21%)
Similarity:413/1097 - (37%) Gaps:257/1097 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 RHHHKMVRDDDNNSAAHSSDSKSPSQRKSRIGD---------------GASDPDSDWTRSNQRWM 165
            |.:..|::.....:.:.|.:|....:|.|.:.|               .||:.:....:.::.||
  Rat   246 RLYPDMLQSSSQLTHSRSRESLCSIRRASSVHDIEGFNVHPKNIFRDRHASEDNGRNVKVSRSWM 310

  Fly   166 KLRTTVQISSAIQKKPPLKREDSFLKRFST-RQIPETQETVEDTGSE---SASGDVDKSV----- 221
            .......|.|::..    ...||.|.::|| .:||:......|..:|   ::....||::     
  Rat   311 AGGPFNHIKSSLLG----STSDSNLNKYSTINKIPQLTLNFSDVKTEKKNTSPPSSDKTIIAPKV 371

  Fly   222 -KRRRRYLQKRRSVVN-------------PDENFY-----------FYWLMMLTVCVLYNLWTLI 261
             :|.....:|...|::             |..|.:           :.||::|.|     ::|.|
  Rat   372 KERTHNVTEKVTQVLSLGADVLPEYKLQTPRINKFTILHYSPFKAVWDWLILLLV-----IYTAI 431

  Fly   262 V-------------RQSFPELQQSVPTFWLICDSMTDVVFILDIIVQLRTGYLEQG-LMVYDDRK 312
            .             .|...|...|.....:: |.:.|::||:||::..||.|:.|. .:|.|..|
  Rat   432 FTPYSAAFLLNDREEQKRRECGYSCSPLNVV-DLIVDIMFIIDILINFRTTYVNQNEEVVSDPAK 495

  Fly   313 LACHYVHSRDFIFDMIALIPLDLLQLKMGTHPLLRFTRFFKVYRSVRFYYIVESRTVWPNLWRVV 377
            :|.||.... |:.||:|.||.|||....|:..........|..|.:|...:......:......|
  Rat   496 IAVHYFKGW-FLIDMVAAIPFDLLIFGSGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAV 559

  Fly   378 --NLIHILLILAHWFGCFYFLLSEAE-GFQGD---WV--------YPYRPGDYA---TLTRKYLG 425
              .|:.|..::|||..|.::.:...| .:..|   |:        ..|...|.:   ::..||:.
  Rat   560 LMLLMCIFALIAHWLACIWYAIGNVERPYLTDKIGWLDSLGTQIGKRYNDSDSSSGPSIKDKYVT 624

  Fly   426 SLYWSTLTLTTIG-DLPTPETNAEYIFTIVSYLIGVFIFATIVGQVGNVITNRNANRLEFERLLD 489
            :||::..:||::| ...:|.||:|.||:|...|||..::|:|.|.|..:|....:....:...:.
  Rat   625 ALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHMQML 689

  Fly   490 GAKTYMRHHKVPGGMKRRVLRWYDYSWSRGRIQGGGDINTALGLLPDKLKTELALHVNLSVLKKV 554
            ..|.::|.|::|..:::|:..::.::|:   ...|.|:|..|...|:.|:.::.||:|.::|:..
  Rat   690 RVKEFIRFHQIPNPLRQRLEEYFQHAWT---YTNGIDMNMVLKGFPECLQADICLHLNQTLLQNC 751

  Fly   555 TIFQECQPEFLHDLVLKMKAYIFTPGDSICRKGEVAREMFIIADGILEVLSETGKVLTTMKAGDF 619
            ..|:......|..|.:|.|.....|||::...|:|...::.::.|.:|:|.: ..|:..:...|.
  Rat   752 KAFRGASKGCLRALAMKFKTTHAPPGDTLVHCGDVLTALYFLSRGSIEILKD-DIVVAILGKNDI 815

  Fly   620 FGEIGILNLDGLNKRTADVRSVGYSELFSLSREDVLAAMKDYPDAQEILQTLGRKRLMEVRCVNK 684
            |||:..|.... .|..||||::.|.:|..:.|||:|..:..||:..:...|              
  Rat   816 FGEMVHLYAKP-GKSNADVRALTYCDLHKIQREDLLEVLDMYPEFSDHFLT-------------- 865

  Fly   685 KYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSENSASKKIVDKLKHDVKGFRNVLKKSRTS 749
                                                    :.::...|:|               
  Rat   866 ----------------------------------------NLELTFNLRH--------------- 875

  Fly   750 RKSDESLEMQPLHNTSPRGSKILLKRMSRVRSDEKDADSAEAKDELHDKTPSPIGAGLPLLQRLR 814
                ||.:.|.::::.....|:..:|:|.....:||.....:.::..|.|.:        ::|.:
  Rat   876 ----ESAKSQSINDSEGDTCKLRRRRLSFESEGDKDFSKENSANDADDSTDT--------IRRYQ 928

  Fly   815 LLKEKQDREERAVKSTPPQKSPPHSHVTCTLSPQESIQEEPEREFSEGFPLIQRLQQLKIKNEPQ 879
              ..|:..||:        ||...|.::       ||.:|.:..|........|:  :|......
  Rat   929 --SSKKHFEEK--------KSRSSSFIS-------SIDDEQKPLFLGTVDSTPRM--VKASRHHG 974

  Fly   880 ANAAEPGVVMVNTPPNISSK--IDSHFAASQAGASHP---GPNG---GAIGISAPGQSLTVAQIK 936
            ..||.|...:.....:.|.|  .|:|....:...:.|   .|:|   .|.|||.....||..:: 
  Rat   975 EEAAPPSGRIHTDKRSHSCKDITDTHSWEREHARAQPEECSPSGLQRAAWGISETESDLTYGEV- 1038

  Fly   937 PIMKVSFKQKIQQMQGGGGGASSSPGPSTGAIAKKEPPKSLALVAKHATSEDPVAAAGLGLGSGS 1001
                   :|::..:|.......|.......||        |.|:.|..|...|            
  Rat  1039 -------EQRLDLLQEQLNRLESQMTTDIQAI--------LQLLQKQTTVVPP------------ 1076

  Fly  1002 SSGIATISKRVVKP------QSHRMATPLQSDTDTDGTPIKPW--------SKLKLATLMSSSYT 1052
            :..:.|......:|      .||..|:   ..||...:|....        ||||....:||. .
  Rat  1077 AYSMVTAGAEYQRPILRLLRTSHPRAS---IKTDRSFSPSSQCPEFLDLEKSKLKSKESLSSG-K 1137

  Fly  1053 SLTNCSPDDLASPLKNYSLSNI---PQQMESHTRP-RHHSARSSSRSPRH--GHHHH 1103
            .|...|.|:|.|.||..|.::.   |:|.:|:..| ||.|...||.|...  |.|.|
  Rat  1138 RLNTASEDNLTSLLKQDSDASSELDPRQRKSYLHPIRHPSLPDSSLSTVGILGLHRH 1194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_001245691.1 Ion_trans 260..481 CDD:278921 67/252 (27%)
Ion_trans_2 382..476 CDD:285168 32/109 (29%)
Crp 550..>680 CDD:223736 34/129 (26%)
CAP_ED 556..668 CDD:237999 32/111 (29%)
Kcnh7XP_006234331.1 PAS_9 29..134 CDD:290162
PAS 41..130 CDD:238075
Ion_trans 456..679 CDD:278921 63/224 (28%)
Ion_trans_2 <622..676 CDD:285168 21/53 (40%)
Crp 747..>877 CDD:223736 36/204 (18%)
CAP_ED 753..864 CDD:237999 32/112 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338732
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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