DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cngl and Kcnh2

DIOPT Version :9

Sequence 1:NP_001245691.1 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:XP_006235929.2 Gene:Kcnh2 / 117018 RGDID:621414 Length:1234 Species:Rattus norvegicus


Alignment Length:1020 Identity:216/1020 - (21%)
Similarity:378/1020 - (37%) Gaps:246/1020 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GAGGSGGAGGHSDGGYHKRHHHKMVRDDDNNSAAHSSDSKS----------------PSQRKSRI 146
            |:.||.||.|            .:|.|.|...||.||:|.:                ..:|::.:
  Rat   254 GSTGSPGAPG------------AVVVDVDLTPAAPSSESLALDEVSAMDNHVAGLGPAEERRALV 306

  Fly   147 GDGAS------------------DPDSDW-------TRSNQRWMKLRTT-----VQISSAIQKKP 181
            |..::                  :||:..       |||.:....:|..     ::...|....|
  Rat   307 GPASASPVASIRGPHPSPPAQSLNPDASGSSCSLARTRSRESCASVRRASSADDIEAMRAGALPP 371

  Fly   182 PLKR-----------------EDSFLKRFST-RQIPETQETVEDTGSES--ASGDVDKSV----- 221
            |.:.                 .||.|.|:.| .:||:......|...:.  ||...|:.:     
  Rat   372 PPRHASTGAMHPLRSGLLNSTSDSDLVRYRTISKIPQITLNFVDLKGDPFLASPTSDREIIAPKI 436

  Fly   222 -KRRRRYLQKRRSVVN------PD----------------ENFYFYWLMMLTVCVLYN-LWT--- 259
             :|.....:|...|::      |:                ..|...|..::.:.|:|. ::|   
  Rat   437 KERTHNVTEKVTQVLSLGADVLPEYKLQAPRIHRWTILHYSPFKAVWDWLILLLVIYTAVFTPYS 501

  Fly   260 --LIVRQSFPELQQSVPTFWLIC------DSMTDVVFILDIIVQLRTGYLEQG-LMVYDDRKLAC 315
              .:::::  |.....|.....|      |.:.|::||:||::..||.|:... .:|....::|.
  Rat   502 AAFLLKET--EDGSQAPDCGYACQPLAVVDLLVDIMFIVDILINFRTTYVNANEEVVSHPGRIAV 564

  Fly   316 HYVHSRDFIFDMIALIPLDLLQLKMGTHPLL------RFTRFFKVYRSVRFYYIVESRTVWPNLW 374
            ||.... |:.||:|.||.|||....|:..|:      |..|..:|.|.:..|....:..::    
  Rat   565 HYFKGW-FLIDMVAAIPFDLLIFGSGSEELIGLLKTARLLRLVRVARKLDRYSEYGAAVLF---- 624

  Fly   375 RVVNLIHILLILAHWFGCFYFLLSEAEGFQGD----WVY--------PYRPGDYA--TLTRKYLG 425
               .|:....::|||..|.::.:...|....|    |::        ||......  ::..||:.
  Rat   625 ---LLMCTFALIAHWLACIWYAIGNMEQPHMDSHIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVT 686

  Fly   426 SLYWSTLTLTTIG-DLPTPETNAEYIFTIVSYLIGVFIFATIVGQVGNVITNRNANRLEFERLLD 489
            :||::..:||::| ...:|.||:|.||:|...|||..::|:|.|.|..:|....:....:...:.
  Rat   687 ALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQML 751

  Fly   490 GAKTYMRHHKVPGGMKRRVLRWYDYSWSRGRIQGGGDINTALGLLPDKLKTELALHVNLSVLKKV 554
            ..:.::|.|::|..:::|:..::.::||   ...|.|:|..|...|:.|:.::.||:|.|:|:..
  Rat   752 RVREFIRFHQIPNPLRQRLEEYFQHAWS---YTNGIDMNAVLKGFPECLQADICLHLNRSLLQHC 813

  Fly   555 TIFQECQPEFLHDLVLKMKAYIFTPGDSICRKGEVAREMFIIADGILEVLSETGKVLTTMKAGDF 619
            ..|:......|..|.:|.|.....|||::...|::...::.|:.|.:|:| ....|:..:...|.
  Rat   814 KPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEIL-RGDVVVAILGKNDI 877

  Fly   620 FGEIGILNLDGL-NKRTADVRSVGYSELFSLSREDVLAAMKDYPD-------AQEILQTL----- 671
            |||  .|||... .|...|||::.|.:|..:.|:|:|..:..||:       :.||...|     
  Rat   878 FGE--PLNLYARPGKSNGDVRALTYCDLHKIHRDDLLEVLDMYPEFSDHFWSSLEITFNLRDTNM 940

  Fly   672 ----------------GRKRLMEVRCVNKKYAKAQSDKEAAAYAAAHPHHHQS---HHQGQVHQS 717
                            .|||.:..|....|..:...:..|.....|......|   ...|...:|
  Rat   941 IPGSPSSAELESGFNRQRKRKLSFRRRTDKDTEQPGEVSALGQGPARVGPGPSCRGQPGGPWGES 1005

  Fly   718 DSSENSASKKIVDKLKHDVKGFRNVLKKSRTSRKSDESLEMQPLHNTSPRGSKILLKRMSRVRSD 782
            .||..|:.:...|:                ...:|...|.:.|..:..|.|             |
  Rat  1006 PSSGPSSPESSEDE----------------GPGRSSSPLRLVPFSSPRPPG-------------D 1041

  Fly   783 EKDADSAEAKDELHDKTPSPI-GAGLPLLQRLRLLKEKQDREERAVKSTP---------PQKSPP 837
            ....:......|....|.:|: ||...:........:.:.|:.:.:...|         |..||.
  Rat  1042 SPGGEPLTEDGEKSSDTCNPLSGAFSGVSNIFSFWGDSRGRQYQELPRCPAPAPSLLNIPLSSPG 1106

  Fly   838 HSHVTCTLSPQESIQEEPER---EFSEGFPLIQRLQQLKIKNEPQANAA--EPGVVMVNTPPNI- 896
            ........|..:::|.:..|   ..|.....:.:|.|.::...|.|.:|  .||....:|.|.: 
  Rat  1107 RRSRGDVESRLDALQRQLNRLETRLSADMATVLQLLQRQMTLVPPAYSAVTTPGPGPTSTSPLLP 1171

  Fly   897 -----SSKIDSHFAASQ--------AGASHPGPNGGAIGISAPGQ 928
                 :..:||....||        |||.....:|....:|.|||
  Rat  1172 VGPVPTLTLDSLSQVSQFVAFEELPAGAPELPQDGPTRRLSLPGQ 1216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_001245691.1 Ion_trans 260..481 CDD:278921 64/248 (26%)
Ion_trans_2 382..476 CDD:285168 31/108 (29%)
Crp 550..>680 CDD:223736 39/158 (25%)
CAP_ED 556..668 CDD:237999 33/119 (28%)
Kcnh2XP_006235929.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338752
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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