DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cngl and hcn4

DIOPT Version :9

Sequence 1:NP_001245691.1 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:XP_002944030.2 Gene:hcn4 / 100498501 XenbaseID:XB-GENE-940130 Length:2061 Species:Xenopus tropicalis


Alignment Length:1008 Identity:216/1008 - (21%)
Similarity:408/1008 - (40%) Gaps:227/1008 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 AAHSS---DSKSPSQRKSRI---GDGA-----SDPDSDWTRSNQRWMKLRTTVQISSAIQKKPPL 183
            ::||.   .|:||:|..|.:   .:|:     .||.....|            |..:.:|   |.
 Frog  1155 SSHSPAQISSQSPAQELSSLIPKLEGSEQTEVGDPGGFIQR------------QFGALLQ---PA 1204

  Fly   184 KREDSFLKRFSTRQIPE-TQETVEDTGSESASGDVDKSVKRRRRYLQKRRSVVNPDENFYFYWLM 247
            ..:.| |:.|.:.:..| .|:.|:..||                      .:::|..:|.|||.:
 Frog  1205 VNKFS-LRMFGSHKAVEIEQQRVKSAGS----------------------WIIHPYSDFRFYWDL 1246

  Fly   248 MLTVCVLYNLWTLIVRQSFPELQQSVPTFWLICDSMTDVVFILDIIVQLRTGYL--EQGLMVYDD 310
            ::.:.::.||..|.|..:|.:.:.:.|  |::.:.::|..|:.|:::..|||.:  :...::.|.
 Frog  1247 IMLLLMVANLIILPVGITFFKDENTPP--WIVFNVLSDTFFLADLVLNFRTGIVVEDNTEIILDP 1309

  Fly   311 RKLACHYVHSRDFIFDMIALIPLDL------LQLKMGTH--------PLLRFTRFFKVYRSVRFY 361
            ..:...|:.|. |:.|.::.||:|.      |:..:.|.        .::|||:...:.|.:|..
 Frog  1310 HTIKMKYLKSW-FLVDFVSSIPVDYIFLIVDLETNVDTEVYKTARALRIVRFTKILSLLRLLRLS 1373

  Fly   362 YIVESRTVWPNLW-----------RVVNLIHILLILAHWFGCFYFLLSEAEGFQGD-WVYPYRPG 414
            .::.....|..::           |:.|||.::|:|.||.||..||:...:.|..| ||......
 Frog  1374 RLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPEDCWVSINHMA 1438

  Fly   415 DYATLTRKYLGSLYWSTLTLTTIG-DLPTPETNAEYIFTIVSYLIGVFIFATIVGQVGNVITNRN 478
            : .:..::|..:::.:...:..|| ....||...:...|::|.::|...:|..:|....:|.:.:
 Frog  1439 N-ESWGKQYSHAIFKAMSHMLCIGYGQQAPEGMTDVWLTMLSMIVGATCYAMFIGHATALIQSLD 1502

  Fly   479 ANRLEFERLLDGAKTYMRHHKVPGGMKRRVLRWYDYSWSRGRIQGG-GDINTALGLLPDKLKTEL 542
            ::|.:::......:.||..||:|...::|:..:|::     |.||. .|....||.|.:.||.|:
 Frog  1503 SSRRQYQEKYKQVEQYMSFHKLPPDTRQRIHEYYEH-----RYQGKMFDEENILGELSEPLKEEI 1562

  Fly   543 ALHVNLSVLKKVTIFQECQPEFLHDLVLKMKAYIFTPGDSICRKGEVAREMFIIADGILEVLSET 607
            ......:::..:.:|....|.|:..::.|::..:|.|||.|.|:|.|.::|:.|..|::.:|:. 
 Frog  1563 VNFNCRNLVANMPLFANADPNFVTAMLTKLRFEVFQPGDYIIREGTVGKKMYFIQHGVVSILTR- 1626

  Fly   608 GKVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYSELFSLSREDVLAAMKDYPDAQEILQTLG 672
            |...|.:..|.:||||.:|.   ..:|||.||:..|..|:|||.::....:::||..:...:|:.
 Frog  1627 GSKETKLSDGSYFGEICLLT---RGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVA 1688

  Fly   673 RKRLMEVRCVNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSEN--------------- 722
            ..||..:...|....:.:::..:.:.      :::...|...|..|::.|               
 Frog  1689 MDRLDRIGKKNSILLRKRAENSSGSV------NNEIIQQIVKHDRDTAHNIQDIQCLAATRDPNK 1747

  Fly   723 ---------------SASKKIVDKLKHDVKGFRNVLKK----------SRTSRKSDESLE-MQPL 761
                           :|:..:...|.|......||...          ||.:|:|..||. ..|.
 Frog  1748 PFIWEPLVHAPLQTAAATTNVAIALTHQQNLQANVFLPPLSLPETAYVSRQARRSQPSLRGSHPS 1812

  Fly   762 HNTSPRGSKILLKRMSRVRSDEKDADSAEAKDELHDKTPSPIGAGLPLLQRLRLLKEKQDREERA 826
            ..:||.|::..|:....:   ...:.|...|..::.:.|.     :|    :||.:.::...:.|
 Frog  1813 SVSSPSGTQSHLQTPLGI---SPSSPSGVQKQSINGQCPQ-----IP----IRLSQSQRGEPQTA 1865

  Fly   827 VKSTPPQKSPPHSHVTCTLSPQESIQEEPEREFSEGFPLIQRLQQLKIKNEPQANAAEPGVVMVN 891
            .|       ||       :.|.: :|....|..|....::|         :....|..|.|    
 Frog  1866 AK-------PP-------ILPSQ-VQLSRSRGTSASTSVLQ---------QGMGPAGSPVV---- 1902

  Fly   892 TPPNISSKIDSHFAASQAGASHPGPNGGAIGI------SAPGQSLTVAQIK--PIMKV------- 941
             |.::|.: ..|::.|:|..||       |.:      |:|.|.:....|:  ||.::       
 Frog  1903 -PGSLSGR-TLHYSLSRASGSH-------ISLLMQQAASSPQQLVKYRSIQGLPIGRLSQDVRLM 1958

  Fly   942 -----SFKQKIQQMQGGG----GGASSSPG----------PSTGAIAKKEPPKSLAL----VAKH 983
                 |...|:...|.|.    ....|||.          ||..|..:::|...|..    |:..
 Frog  1959 SASQPSLPNKVTHQQDGSMLQIASNKSSPTVSAMLVRPSLPSPSAHPQQQPSGPLVFSGRPVSGS 2023

  Fly   984 ATSEDPVAAAGLGLGSGSSSGIATISKRVVKPQ 1016
            ||.:.||:|......|...|.:.:....|.||:
 Frog  2024 ATPQSPVSAPRPAGQSRKGSVVFSSDVEVNKPK 2056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_001245691.1 Ion_trans 260..481 CDD:278921 54/249 (22%)
Ion_trans_2 382..476 CDD:285168 23/95 (24%)
Crp 550..>680 CDD:223736 39/129 (30%)
CAP_ED 556..668 CDD:237999 36/111 (32%)
hcn4XP_002944030.2 Plasmodium_HRP <67..248 CDD:253181
Ion_trans_N 1197..1239 CDD:285597 11/67 (16%)
Ion_trans 1259..1506 CDD:278921 54/250 (22%)
Crp 1570..>1708 CDD:223736 40/141 (28%)
CAP_ED 1576..1684 CDD:237999 36/111 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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