DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cngl and cnga4

DIOPT Version :10

Sequence 1:NP_727848.3 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:XP_017945387.2 Gene:cnga4 / 100489546 XenbaseID:XB-GENE-996762 Length:573 Species:Xenopus tropicalis


Alignment Length:212 Identity:43/212 - (20%)
Similarity:64/212 - (30%) Gaps:72/212 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 CGYCINSKTGGTTTSTVPTDEIIKPFKCIDEADDCADRANFCQRKFYKRMMSLQCAKTCKFCVDD 118
            ||.....:||||..|  ...:..:|....|.:.|....|...|:..|..                
 Frog    59 CGRSARPQTGGTWES--QWSKTSQPEDLTDGSYDDVLNAEQLQKLLYLL---------------- 105

  Fly   119 DEYEEEETEDS-----------------------REI--------HISHLKSKMGEKTVQKLEEL 152
                 |.|||.                       ||:        .|:|....:.||.:..|..|
 Frog   106 -----ESTEDPVIIERALITLGNNAAFSVNQAIIRELGGIPIVANKINHSNQSIKEKALNALNNL 165

  Fly   153 KI-VDN-------VIDLLRNATTPTTFMEKKPRRFSKRIENISSEMTDT---AECVDRASDCERN 206
            .: |:|       |:.||.|.:......|...|   .::::....:.|:   .|.:.|.....:|
 Frog   166 SVNVENQIKIKVQVLKLLLNLSENPAMTEGLLR---AQVDSSFLSLYDSHVAKEILLRVLTLFQN 227

  Fly   207 QKLCT----HRAYSPLF 219
            .|.|.    |.|..|.|
 Frog   228 IKNCLKIEGHLAVQPTF 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_727848.3 Ion_trans 240..509 CDD:459842
CAP_ED 584..696 CDD:237999
dermokine <1688..>1775 CDD:455732
cnga4XP_017945387.2 Ion_trans 55..295 CDD:459842 43/212 (20%)
CAP_ED 369..485 CDD:237999
CLZ 485..555 CDD:465160
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.