DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cngl and kcnh5b

DIOPT Version :9

Sequence 1:NP_001245691.1 Gene:Cngl / 32468 FlyBaseID:FBgn0263257 Length:1970 Species:Drosophila melanogaster
Sequence 2:XP_002664253.1 Gene:kcnh5b / 100331767 ZFINID:ZDB-GENE-090319-1 Length:1005 Species:Danio rerio


Alignment Length:1007 Identity:213/1007 - (21%)
Similarity:377/1007 - (37%) Gaps:275/1007 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 SNQRWMKL----RTTVQISSAIQKKPPLKREDSFLKRFSTRQIPETQETVEDTGSESASGDVDKS 220
            |.:.|.|.    |......|.||:..|:.|.|      .|...|.....|...||:...      
Zfish   142 STRGWTKFARLTRALTNSKSTIQQITPVSRTD------VTSHKPSRLAEVLQLGSDILP------ 194

  Fly   221 VKRRRRYLQKRRSVVNPDENFYFY--------WLMML-----TVCVLYNLWTLIVRQSFPELQQS 272
                 :|  |:.:...|......|        |::::     .:.|.||:       ||...|.:
Zfish   195 -----QY--KQEAPKTPPHIILHYCTFKTTWDWVILILTFYTAIMVPYNV-------SFKTKQNN 245

  Fly   273 VPTFWLICDSMTDVVFILDIIVQLRTGYLEQGLMVYDDRKL-ACHYVHSRDFIFDMIALIPLDLL 336
            |.  ||:.||:.||:|::||::...|.::..|..|..|..| ..:|:.:. |:.|:::.:|.|::
Zfish   246 VT--WLVLDSVVDVIFLVDIVLNFHTTFVGPGGEVISDPNLIRMNYLKTW-FVIDLLSCLPYDII 307

  Fly   337 ----QLKMGTHPL---LRFTRFFKVYRSVR--FYYIVESRTVWPNLWRVVNLIHILLILAHWFGC 392
                .:..|...|   |:..|..::.|..|  .:|:.....|      :|.|:.:..::|||..|
Zfish   308 NAFENVDEGISSLFSSLKVVRLLRLGRVARKLDHYLEYGAAV------LVLLVCVFGLVAHWLAC 366

  Fly   393 FYFLLSEAEGFQ--------GDWVY--------PYR------------PGDYATLTRKYLGSLYW 429
            .::.:.:.|...        ..|::        |||            ||..:.    |:.|||:
Zfish   367 IWYSIGDYEVIDEQTNTIKTDSWLFQLATSIGSPYRYNASGTGQWEGGPGKDSL----YITSLYF 427

  Fly   430 STLTLTTIG-DLPTPETNAEYIFTIVSYLIGVFIFATIVGQVGNVITNRNANRLEFERLLDGAKT 493
            :..:||||| ....|.|:.|.||::...::|..::|||.|.|..:.....||...:..:|:..:.
Zfish   428 TMTSLTTIGFGNIAPTTDGEKIFSVAMMMVGSLLYATIFGNVTTIFQQMYANTNRYHEMLNNVRD 492

  Fly   494 YMRHHKVPGGMKRRVLRWYDYSWSRGRIQGGGDINTALGLLPDKLKTELALHVNLSVLKKVTIFQ 558
            :::.::||.|:..||:.:...:||..:   |.|....|.:.|..::.::.:|:|..|..:...|:
Zfish   493 FLKLYQVPKGLSERVMDYIVSTWSMSK---GIDTEKVLSICPKDMRADICVHLNRKVFNEHPAFR 554

  Fly   559 ECQPEFLHDLVLKMKAYIFTPGDSICRKGEVAREMFIIADGILEVLSETGKVLTTMKAGDFFGEI 623
            ......|..|.::.:.....|||.|...||....:..:..|.|||:.: .:|:..:..||.||::
Zfish   555 LASDGCLRSLAVEFQMIHSAPGDLIFHAGESVDLLCFVVSGSLEVIQD-DEVIAILGKGDVFGDV 618

  Fly   624 GILNLDGLNKRTADVRSVGYSELFSLSREDVLAAMKDYPD-----AQEILQTLG-RKRLM--EVR 680
             ......|....|:||::.|.:|..:.||.:|..:..|..     ::.:..|.. |||.:  ::.
Zfish   619 -FWKETTLAHSCANVRALTYCDLHIIKREALLKVLDFYTAFANSFSRNLFLTCNLRKRFVFRKII 682

  Fly   681 CVNKKYAKAQSDKEAAAYAAAHPHHHQSHHQGQVHQSDSSENSASKKI-VDKLKHDVKGFRNVLK 744
            .|.|:..:.|..|..........|..:...|....|.:.....||.:: ::|.:|.::      :
Zfish   683 DVKKEEEERQRSKNEVPLTIPVDHPVRKLFQKFKQQKELRNQGASAQLDLEKNQHHLQ------Q 741

  Fly   745 KSRTSRKSDESLEMQPLHNTSPRGSKILLKRMSRVRSDEKDADSAEAKDELHDKTPSPIGAGLPL 809
            .:|.| |...||....||... .||...:..:|::                              
Zfish   742 PARMS-KPHTSLMQNSLHAVQ-NGSTSSVVTISQI------------------------------ 774

  Fly   810 LQRLRLLKEKQDREERAVKSTPPQKSPPHSHVTCTLSPQ--ESIQEEPEREFSEGFPLI----QR 868
                                ||.|        .|...|:  :||::. .|:|.|..|.:    |.
Zfish   775 --------------------TPIQ--------NCLAYPKPGDSIKQN-NRDFMELKPAVVTSEQV 810

  Fly   869 LQQLKIKNEPQA--------------NAAEPGVVMVNTPPNISSKIDSHFAASQAGASHPGPNGG 919
            ..:||:.|..:.              |.|.||     :||....|                    
Zfish   811 ANRLKVNNTARTKPAGAARGWMRLKNNRAAPG-----SPPEDERK-------------------- 850

  Fly   920 AIGISAPGQSLTVAQIKPIMKVSFKQKIQQMQGGGGGASS------------------------- 959
             .|::...:::::.:|...:||    :|:.::..||...|                         
Zfish   851 -EGLNNAAKAVSMERIASEVKV----QIENVEDVGGSRKSSLRKTDSLDSGLTYSDQRLDRVSEP 910

  Fly   960 -SPGPSTGAI--------------AKKEPPKSL-ALVAKHATSEDPVA-AAGLGLGSGSSSGIAT 1007
             ||.|.||.:              |:.|....: ||..:.||.|:.|. ...|.|.|..:.....
Zfish   911 QSPVPGTGEVYPSSESSFQASLQEARLELRMEIQALNGRMATLEERVGQILRLLLDSSKAKSSED 975

  Fly  1008 ISKR-VVKPQS----HRMATPLQSDTDTDGTP 1034
            ::.| .:|.||    ..::|| .|:.| :|.|
Zfish   976 LTHRPKLKAQSSIPVSNLSTP-DSEKD-EGLP 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CnglNP_001245691.1 Ion_trans 260..481 CDD:278921 65/259 (25%)
Ion_trans_2 382..476 CDD:285168 31/122 (25%)
Crp 550..>680 CDD:223736 33/137 (24%)
CAP_ED 556..668 CDD:237999 28/116 (24%)
kcnh5bXP_002664253.1 PAS 37..131 CDD:238075
PAS_3 40..127 CDD:285623
Ion_trans 233..481 CDD:278921 69/267 (26%)
Ion_trans_2 <421..475 CDD:285168 20/53 (38%)
Crp 546..>666 CDD:223736 29/121 (24%)
CAP_ED 552..662 CDD:237999 28/111 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578334
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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