DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and Ddx50

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_444413.1 Gene:Ddx50 / 94213 MGIID:2182303 Length:734 Species:Mus musculus


Alignment Length:139 Identity:33/139 - (23%)
Similarity:48/139 - (34%) Gaps:27/139 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 APPPPPPADAAPAPAPEPAPAPAPE-AVPAPAADAGGYAAAAAPAGGGSYPTKKRRVARDYAEGG 111
            :||||.|          |...|.|| ::...::|.|..|..:..:      ...:..:..|....
Mouse  1147 SPPPPVP----------PRTGPPPESSLRRSSSDLGPKALCSESS------VSSQHDSAPYIPNS 1195

  Fly   112 AAPTAPA--EPVPAPAPEPEAAPAPAPVAEPALAPSPDAAPAADGASYSAGAAAPAGGASYPAKK 174
            ..|..||  ||||..:..|..|....|...|.......:.|.   :||.:     ....|||.:.
Mouse  1196 RVPLPPAITEPVPNHSGNPMTAVYAIPATRPGYTGYFISTPP---SSYHS-----PSWMSYPPEP 1252

  Fly   175 RRVARDYAE 183
            ..|...:||
Mouse  1253 EDVPPQWAE 1261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120
KH-I_DDX46 1121..1223 CDD:411901
Ddx50NP_444413.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..131
Q motif 134..162
SrmB 136..523 CDD:440279
DEVD box 287..290
GUCT_RHII_Gualpha_beta 565..656 CDD:240593
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 664..734
Blue background indicates that the domain is not in the aligned region.

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