DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prp5 and DDX23

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_004809.2 Gene:DDX23 / 9416 HGNCID:17347 Length:820 Species:Homo sapiens


Alignment Length:950 Identity:298/950 - (31%)
Similarity:431/950 - (45%) Gaps:275/950 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RDRDRERDRERERERDRERERDRDRERDNRHDSRSRDYDMGKSRNGGGGGAGGGSRNMREDRKRG 71
            :|||....:| ||:|.|..:|:|||:|| |..|.|:|....:||                ||:||
Human     9 KDRDASPSKE-ERKRSRTPDRERDRDRD-RKSSPSKDRKRHRSR----------------DRRRG 55

  Fly    72 KDMISDRGKRDDKRRKCSRSKDYEKDNSPHYRRLDKDRDRDRDRDRQREKEREREKEKEREKEKE 136
                   |.|...|   ||||..|::      |..|:|:||::|||.: |:|:|:|:..| ::|:
Human    56 -------GSRSRSR---SRSKSAERE------RRHKERERDKERDRNK-KDRDRDKDGHR-RDKD 102

  Fly   137 RERD-------------KDRERDRQREKESDSRRAAAAAPLIIPLLSTSCSEEEVEEIDK----- 183
            |:|.             |||:..:..|.|...::..|....:..||:...:|||.|...|     
Human   103 RKRSSLSPGRGKDFKSRKDRDSKKDEEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKA 167

  Fly   184 --------------EEQQRRLEQEMIKRR--------------ERIERWRAER-KRDTKAAVVAP 219
                          ||:||.||:|..||:              ||..|.|.|| :|:|..     
Human   168 EREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNG----- 227

  Fly   220 SLVNSAKKWSLEDESEEDDSNPAPPLDSGKKDAEPDSPPSK-FHSIRKRFDDDVVESKFSPVKRP 283
                        :|.||           |::....:...|| .|:|::|:               
Human   228 ------------NEDEE-----------GRQKIREEKDKSKELHAIKERY--------------- 254

  Fly   284 TFSKSFGKLGIGLATKAEADIKKEPPPVDTKKEIKKKPEPVAAKMEIVEEPTVAAGEKTKKEPEQ 348
                    ||                      .|||:                   .:|:...::
Human   255 --------LG----------------------GIKKR-------------------RRTRHLNDR 270

  Fly   349 PHVGAKSEPEVEDKPQPEAEPEDEIDPLDAYMQEVNNEMRRVNNFVNPPAKSQGVVILTG---VA 410
            ..|.           :.:|..:..||                   .||..|.:..|.|.|   :|
Human   271 KFVF-----------EWDASEDTSID-------------------YNPLYKERHQVQLLGRGFIA 305

  Fly   411 ------KKKTTTLKKGEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPF 469
                  :|:..:...|:::|:.. :||   |.|.|:.|      ..|.||:.||.......::. 
Human   306 GIDLKQQKREQSRFYGDLMEKRR-TLE---EKEQEEAR------LRKLRKKEAKQRWDDRHWSQ- 359

  Fly   470 RKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPT 534
                    .:|..||..|...:|.|. .|..||...|.||::|....:....:||:.:.|:::||
Human   360 --------KKLDEMTDRDWRIFREDY-SITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPT 415

  Fly   535 PIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM----EDGDGAIAIIMAPTREL 595
            |||.||||..:..||:||:|:||||||.||::|:...|...|.:    |...|..|||:||||||
Human   416 PIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTREL 480

  Fly   596 CMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 660
            ..||.::..||.|.||:|.|.|.||....:|...|:.|.||::.||||:||:|   ..|...|.|
Human   481 AQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVL---ENRYLVLSR 542

  Fly   661 VTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD---------------------RQTVMFSA 699
            .|||||||||||.||||||.|.:|::     |.:||                     ||||||:|
Human   543 CTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTA 607

  Fly   700 TFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAG---SII 761
            |.|..:|.|||..|::|..|.:|......:.|||.|.::::..|..|||.:|    |.|   .||
Human   608 TMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAIL----EQGFDPPII 668

  Fly   762 VFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDL 826
            :||::::..|:|.:.|.|..|...:||||..|..|:..:.:.|:|...:|:||.||.||:|::|:
Human   669 IFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDV 733

  Fly   827 ILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQS 866
            .:|||||:..:.|||:||.||||||||.|.|.||:|.|.|
Human   734 SMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDS 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653 10/91 (11%)
DEAD-like_helicase_N 454..899 CDD:475120 182/445 (41%)
KH-I_DDX46 1121..1223 CDD:411901
DDX23NP_004809.2 RS domain 1..221 75/247 (30%)
PTZ00121 <4..>351 CDD:173412 118/509 (23%)
SF-CC1 80..>209 CDD:273721 34/130 (26%)
Q motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00552 391..419 8/27 (30%)
SrmB 392..783 CDD:440279 167/388 (43%)
DEAD box. /evidence=ECO:0000255|PROSITE-ProRule:PRU00541 549..552 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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