DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and PRP5

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_009796.1 Gene:PRP5 / 852539 SGDID:S000000441 Length:849 Species:Saccharomyces cerevisiae


Alignment Length:1085 Identity:287/1085 - (26%)
Similarity:482/1085 - (44%) Gaps:295/1085 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 VEEIDKEEQQRRLEQEMIKRRERIERWRAERKRDTKAAVVAPSLVNSAKKWSLEDESEEDDSNPA 242
            :|.||.::...| |..:.:||:::.:|:.::                                  
Yeast     1 METIDSKQNINR-ESLLEERRKKLAKWKQKK---------------------------------- 30

  Fly   243 PPLDSGKKDAEPDSPPSKFHSIRKRFDDDVVESKFSPVKRPTFSKSFGKLGIGLATKAEADIKKE 307
                 .:.||:.:...|:         :|:|.:...           ||......|:.:..:|:|
Yeast    31 -----AQFDAQKEHQTSR---------NDIVTNSLE-----------GKQTTEKFTERQERVKEE 70

  Fly   308 PPPVDTKKEIKKKPEPVAAKMEIVEEPTVAAGEKTK---------KEPEQPHVGA--KSEPEVED 361
            ..  ..|.|.:|..|||:.|      |:....:::|         .:.:...:|.  :|:..::.
Yeast    71 LR--KRKNEFRKSDEPVSVK------PSKKKSKRSKVKKKISFDFSDDDDSEIGVSFRSKEHIQK 127

  Fly   362 KPQPEAEPEDEIDPLDAYMQEVNNEMRRVNNFVNPPAKSQGVVILTGVAKKKTTTLKKGEV--IE 424
            .|    |.::|.||||.:|..:..|  :::|       |:|:             ..:|::  :|
Yeast   128 AP----EHDNEKDPLDEFMTSLKEE--KMSN-------SKGM-------------YDRGDILDVE 166

  Fly   425 QNMDSLEYSSEDELEDIRDTAVNLA----MKHRKELAKIDHSSVTYAPFRKNFYVEVPELTRMTA 485
            ..:..|..:.::::||..|.: |:|    :|.:|.:.:|.:|.....||:||||:|...::.|:.
Yeast   167 DQLFELGGTDDEDVEDNTDNS-NIAKIAKLKAKKRVKQIYYSPEELEPFQKNFYIESETVSSMSE 230

  Fly   486 ADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVL-RRLGFEKPTPIQCQAIPAIMSGRD 549
            .:||:.|..|:.|::||.|||||:..|:|.|:|...|.:: .:|.|...||||.||:||||||||
Yeast   231 MEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRD 295

  Fly   550 LIGIAKTGSGKTLAFILPMFRHILDQ-PSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKS-LGL 612
            :|||:|||||||::::||:.|.:..| |..:...|.:.:|:||||||.:||.:::.||::: ..:
Yeast   296 VIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSI 360

  Fly   613 RPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGF 677
            |.||..||:.:.:||.:||||.||:|.||||.||:|..|.|::.:.:|:|:||:|||||:||:||
Yeast   361 RSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGF 425

  Fly   678 EPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVIL-NDD 741
            |||:.:|:..||||:|.|:||||||.::.:.|.|:|..||.:.:..:.:|.:.|:|...|. ::|
Yeast   426 EPQITQIMKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPISITINSKGMVNENVKQKFRICHSED 490

  Fly   742 AKFFKLLELL----GIYQEAGS---------------IIVFVDKQENADILLRDLMKASYPCMSL 787
            .||..|::|:    ..:.|..|               .|:||..|...|.:.:.|:.|.....::
Yeast   491 EKFDNLVQLIHERSEFFDEVQSENDGQSSDVEEVDAKAIIFVSSQNICDFISKKLLNAGIVTCAI 555

  Fly   788 HGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAG 852
            |.|....:|...:..||..|..:|:.|.|.:|||:|.::.||:.|:....:..|||..|||.|..
Yeast   556 HAGKPYQERLMNLEKFKREKNSILLCTEVLSRGLNVPEVSLVIIYNAVKTFAQYVHTTGRTARGS 620

  Fly   853 KKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL-WTEYKALQEAEGK--------TVHTG 908
            :.|:|.|.:..:      ::..|..||..:...|::|| ..:.|.|||...|        .....
Yeast   621 RSGTAITLLLHD------ELSGAYILSKAMRDEEIKALDPLQAKELQEMSAKFESGMKKGKFRLS 679

  Fly   909 GGFSGKGFKFDEQEFNAAKESKKLQKAALGLADSDDEEDIEQDIDQQIEQIFAAKRTVKDTSAAA 973
            .||.|||.:      |...:.::.|...|.|..:|...|   |::::|                 
Yeast   680 KGFGGKGLE------NIKSKREEAQNKDLELKKNDKRSD---DLEKKI----------------- 718

  Fly   974 TAAAAAAAAAAAAAAAVSGANPALASAAAQAAAAAAAANIAIAAASAPAAAGGAPSVAMGGALSS 1038
                               :||                            ..|..||:...||..
Yeast   719 -------------------SNP----------------------------REGHDSVSESSALIP 736

  Fly  1039 DKLELAKRLASKINSSKNLDTKGSVVTVEPMIKGPHVTGAAATLLTARTVAEQMAAKLNNKLNYQ 1103
                                                                        :|||:
Yeast   737 ------------------------------------------------------------RLNYE 741

  Fly  1104 PKEDEEGLGPLVGGTTNPFTKYEEELEINDFPQQARWKVTSKEALAQISEYSEAGLTVRGTYVPQ 1168
                      |...:|:....:..::.|||.||..||:.|....|..|...:...:|.:|.:.|:
Yeast   742 ----------LFKESTDGSIIFYAKVYINDLPQIVRWEATKNTTLLFIKHETGCSITNKGKFYPE 796

  Fly  1169 GKNP--PDGERKLYLAIESCSELAVQKAKREITRLIKEELLKLSS 1211
            ||.|  .:.|.||||.||...|..:|.:...:.:.:||.::|.:|
Yeast   797 GKEPKNENDEPKLYLLIEGQDEKDIQLSIELLEQKVKEGVVKAAS 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653 23/102 (23%)
DEAD-like_helicase_N 454..899 CDD:475120 180/468 (38%)
KH-I_DDX46 1121..1223 CDD:411901 29/93 (31%)
PRP5NP_009796.1 DEADc_DDX46 244..468 CDD:350711 112/223 (50%)
SrmB 255..707 CDD:440279 169/463 (37%)
KH-I_PRP5_like 749..837 CDD:411902 27/87 (31%)

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