DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and AT5G63120

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_974985.1 Gene:AT5G63120 / 836432 AraportID:AT5G63120 Length:591 Species:Arabidopsis thaliana


Alignment Length:484 Identity:207/484 - (42%)
Similarity:300/484 - (61%) Gaps:33/484 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   433 SSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEG 497
            ||:.||:.:             .|.|.:..::.:  |.||||||.|.:..||..||..||::.: 
plant   104 SSKRELDSV-------------SLPKQNFGNLVH--FEKNFYVESPTVQAMTEQDVAMYRTERD- 152

  Fly   498 IQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTL 562
            |.|:|:..|||:|.:.........:|.:.:|||.:|||||.|..|..:.||||||||:|||||||
plant   153 ISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTL 217

  Fly   563 AFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQI 627
            |::||...|:..||.:...||.|.:|:||||||.:||.::.|||....|:|..|:|||.....||
plant   218 AYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQI 282

  Fly   628 AELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDR 692
            .:|:||.||::.||||:||||....   |||:||||:||||||||.|||||||:.:|:..:||||
plant   283 RDLRRGVEIVIATPGRLIDMLECQH---TNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDR 344

  Fly   693 QTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKE-VEQHVVILNDDAKFFKLLELLGIYQE 756
            ||:::|||:||::|.|||:.|:.|.:.|:|...:...: :.|.:.|:....|:.:||.||....:
plant   345 QTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMD 409

  Fly   757 AGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGL 821
            ...|::||:.:...|.:.|.|....:|.:::||...|.:||..:.:||||:..::.||.||||||
plant   410 GSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474

  Fly   822 DVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAE 886
            ||||:..|||||.||..|||:||.|||||||.||.|:||.|.:.:::|.::::.:..:|.::|..
plant   475 DVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPT 539

  Fly   887 LQALWTEYKALQEAEGKTVHTGGGFSGKG 915
            |.||             ...:|.|:.|.|
plant   540 LSAL-------------VRSSGSGYGGSG 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120 199/445 (45%)
KH-I_DDX46 1121..1223 CDD:411901
AT5G63120NP_974985.1 DEAD-like_helicase_N 121..543 CDD:475120 195/427 (46%)
Blue background indicates that the domain is not in the aligned region.

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