DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and AT5G51280

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_199941.1 Gene:AT5G51280 / 835202 AraportID:AT5G51280 Length:591 Species:Arabidopsis thaliana


Alignment Length:625 Identity:198/625 - (31%)
Similarity:300/625 - (48%) Gaps:110/625 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 EDEIDPLDAYMQEVNNEMRRVNNFVNPPAKSQGVVILTGVAKK-------------------KTT 415
            |..::..|:|::.|:...||.       ..:|.::...|.|.:                   :.|
plant     2 ESIMEEADSYIEYVSVAERRA-------IAAQKILQRKGKASELEEEADKEKLAEAKPSLLVQAT 59

  Fly   416 TLKKG--------EVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKN 472
            .||:.        ::|.|..:.:|:.|:      :.|.:::     :||||    .:||..    
plant    60 QLKRDVPEVSATEQIILQEKEMMEHLSD------KKTLMSV-----RELAK----GITYTE---- 105

  Fly   473 FYVEVPELT---------RMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRL 528
                 |.||         :|::...:..|.... |.|.|...|.|||.:......:..::.|:..
plant   106 -----PLLTGWKPPLHIRKMSSKQRDLIRKQWH-IIVNGDDIPPPIKNFKDMKFPRPVLDTLKEK 164

  Fly   529 GFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM---EDGDGAIAIIMA 590
            |..:|||||.|.:|.|::|||:||||.|||||||.|:|||....|.:..|   ..|:|.|.:|:.
plant   165 GIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVC 229

  Fly   591 PTRELCMQIGKDIRKFSKSL------GLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLA 649
            |:|||..|..:.:.:|...|      .||.:...||..:..|:..:|||..|:|.||||:.||||
plant   230 PSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLA 294

  Fly   650 ANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILK 714
            .   :..:|....|:.||||||:.|:|||..:..:.|:.:..|||::||||.|.:::..||..|.
plant   295 K---KKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALV 356

  Fly   715 KPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMK 779
            ||:.|.||.......:|.|.|..:..:||...|||.|  .:.:..:::|.:.:.:.|.:...|:.
plant   357 KPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECL--QKTSPPVLIFCENKADVDDIHEYLLL 419

  Fly   780 ASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHR 844
            .....:::|||.||.||:..|..||:||..:|:||.||::|||..|:..|:|||:|...|:||||
plant   420 KGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 484

  Fly   845 CGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTL------IPAELQALWTEYKALQEAEGK 903
            .|||||.||.|.|.|||...||.     ...:||...|      ||..|..|   ...::|||  
plant   485 IGRTGRCGKTGIATTFINKNQSE-----TTLLDLKHLLQEAKQRIPPVLAEL---NDPMEEAE-- 539

  Fly   904 TVHTGGGFSGKGF------------KFDEQEFNAAKESKK 931
            |:....|..|..:            |.:.|:..|...|:|
plant   540 TIANASGVKGCAYCGGLGHRIRDCPKLEHQKSVAISNSRK 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653 3/12 (25%)
DEAD-like_helicase_N 454..899 CDD:475120 170/468 (36%)
KH-I_DDX46 1121..1223 CDD:411901
AT5G51280NP_199941.1 SrmB 145..580 CDD:440279 165/450 (37%)
Blue background indicates that the domain is not in the aligned region.

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