DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prp5 and AT4G33370

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_195063.1 Gene:AT4G33370 / 829474 AraportID:AT4G33370 Length:542 Species:Arabidopsis thaliana


Alignment Length:545 Identity:183/545 - (33%)
Similarity:273/545 - (50%) Gaps:52/545 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   411 KKKTTTLKKGEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDH--SSVTYAPFRKNF 473
            :::...:|:..|.|.....:|:.|:                 :|:|..:..  ..:||......:
plant    14 EERLAQMKRKVVEEPGKGMMEHLSD-----------------KKKLMSVGELARGITYTEPLSTW 61

  Fly   474 YVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQC 538
            :.....:.:|:...::..|.... |.|.|:..|.|||.:.........:.:|:..|...|||||.
plant    62 WKPPLHVRKMSTKQMDLIRKQWH-ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQV 125

  Fly   539 QAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM---EDGDGAIAIIMAPTRELCMQIG 600
            |.:|.::||||:||||.|||||||.|:|||....|.:..|   ..|:|.||:::.|:|||..|..
plant   126 QGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTY 190

  Fly   601 KDIRKFSKSL------GLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 659
            ..:.:|..||      .||.:...||..:..|:..:|:|..|:|.||||:.|:||.....:...|
plant   191 DVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACR 255

  Fly   660 RVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGR 724
            .:|   ||||||:.|:|||..:..:.|:.:..|||::||||.|.:::..|...|.||:.|.||..
plant   256 LLT---LDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRA 317

  Fly   725 SVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHG 789
            .....:|.|.|..:..:||...|||.|  .:....:::|.:.:.:.|.:...|:......:::||
plant   318 GAANLDVIQEVEYVKQEAKIVYLLECL--QKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHG 380

  Fly   790 GIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKK 854
            |.||.|||..|..||:||..:|:||.||::|||..|:..|:|||:|...|:||||.|||||.||.
plant   381 GKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKT 445

  Fly   855 GSAYTFITPEQSRYAGDIIRAMDLSGTL------IP---AELQALWTEYKALQEAEG-KTVHTGG 909
            |.|.|||...||.     |..:||...|      ||   |||.....|.:.:..|.| |.....|
plant   446 GIATTFINKNQSE-----ITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCG 505

  Fly   910 GFSGKGF---KFDEQEFNAAKESKK 931
            |...:..   ||:.|:..|...|:|
plant   506 GLGHRILQCPKFEHQKSVAISSSRK 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120 167/464 (36%)
KH-I_DDX46 1121..1223 CDD:411901
AT4G33370NP_195063.1 SrmB 96..478 CDD:440279 152/391 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.