DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and AT3G06480

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_187299.1 Gene:AT3G06480 / 819825 AraportID:AT3G06480 Length:1088 Species:Arabidopsis thaliana


Alignment Length:658 Identity:202/658 - (30%)
Similarity:322/658 - (48%) Gaps:97/658 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   343 KKEPEQPHVGAK---SEPEVEDKPQPEAEPEDEID-PLDAYMQEVNNEMRRVNNFVNPPA----- 398
            |:|.::.|.|.|   |:|.:   |..|..|..... ..:|..|:.|..:........|.|     
plant   223 KREGDEFHGGKKTGFSQPHL---PNSERSPSQNTHFEANAASQKTNANLAMAQKCNGPQANAAVT 284

  Fly   399 --KSQGVVILTGVAKKKTTTLKKGEVIEQNMDSLEYSSEDELEDI------RDTAVNLAMK---- 451
              :..|..::......:........::.|......:.|.:..|:.      .|:.||:.|:    
plant   285 QFQQPGANLIHQQLGPRAPNQMDQTMLHQKSHVSPFQSNNTYENNLQSRPGNDSYVNMRMEVPVR 349

  Fly   452 -----HRKELAK------------------IDHSSVTYA-PFRKN------FYVEVPELTRMTAA 486
                 |...:.|                  ..|.:..:| |...|      .:|..|::..:  :
plant   350 GAQPLHPAAMPKDIRISGGPPTNADPAMGQTGHGTYGHAGPAFPNKSLVRPHFVTSPDVPHL--S 412

  Fly   487 DVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRL---GFEKPTPIQCQAIPAIMSGR 548
            .||.||...| :...|:..|.|..|:...|:..   |:||.|   ||..|||||.|..|..:..|
plant   413 PVEIYRKQHE-VTTTGENIPAPYITFESSGLPP---EILRELLSAGFPSPTPIQAQTWPIALQSR 473

  Fly   549 DLIGIAKTGSGKTLAFILPMF---RHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSL 610
            |::.||||||||||.:::|.|   ||..:    :..:|...:|:||||||..||..:..:|.:|.
plant   474 DIVAIAKTGSGKTLGYLIPAFILLRHCRN----DSRNGPTVLILAPTRELATQIQDEALRFGRSS 534

  Fly   611 GLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDM 675
            .:...|:|||.....|:.||:|||:|:|.||||:.|:|..   ::.:.::|:.:||||||||.||
plant   535 RISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEM---KMIDFQQVSLLVLDEADRMLDM 596

  Fly   676 GFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVG--GRSVVCKEVEQHVVIL 738
            |||||:.:|::.:.|.|||:|::||:|:::..:|..:|..|::|.:|  ......|.:.|:|.::
plant   597 GFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVV 661

  Fly   739 NDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDF 803
            ....|..:|.::|...:....:|:|...:...|.|.|.:.: .:..:.:||...|.:||..:..|
plant   662 PQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGR-HFGAVVIHGDKTQGERDWVLNQF 725

  Fly   804 KSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRY 868
            :|||..:||||.|||||||:||:.:|:|||.|...||||||.|||||||..|.|:||.|.:..:|
plant   726 RSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKY 790

  Fly   869 AGDIIRAMDLSGTLIPAELQALWTE--------YKALQEAEGKTVH-----------TGGGFSGK 914
            |.|:|:.::.:...:|.:::.:...        |.  |:..|....           :||||.|:
plant   791 APDLIKVLEGANQQVPPQVRDIAMRGGGGGGPGYS--QDRRGMVNRFDSGGGGTRWDSGGGFGGR 853

  Fly   915 GFKFDEQE 922
            |..|..:|
plant   854 GGGFSGRE 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653 12/43 (28%)
DEAD-like_helicase_N 454..899 CDD:475120 168/485 (35%)
KH-I_DDX46 1121..1223 CDD:411901
AT3G06480NP_187299.1 WW 22..52 CDD:459800
DEAD-like_helicase_N 402..814 CDD:475120 162/425 (38%)
Blue background indicates that the domain is not in the aligned region.

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