DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6227 and AT2G47330

DIOPT Version :9

Sequence 1:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_566099.1 Gene:AT2G47330 / 819346 AraportID:AT2G47330 Length:760 Species:Arabidopsis thaliana


Alignment Length:816 Identity:274/816 - (33%)
Similarity:411/816 - (50%) Gaps:123/816 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 SKSFGKLGIGLATKAEADIKKEPPPVDTKKEIKKKPEPVAAKMEIVEEPTVAAGEKTKKEPEQPH 350
            ::.||..|.|:..:.....::...|                  :.:..|..:.|....::.:..:
plant     3 NRKFGMEGFGINRQTSYSFERSQAP------------------QRLYVPPSSRGGDNSEDADLDN 49

  Fly   351 V----GAKSEPEVEDKPQPEAE--PEDEIDPLDAYMQEVNNEMRRVNNFVNPPAKSQGVVILTGV 409
            :    ..::|.::|:.....|.  ..||||||||:|:.::.||:..     ||.|          
plant    50 IDYMENEEAEEDIEEGGSAAASGGEVDEIDPLDAFMEGIHQEMKSA-----PPPK---------- 99

  Fly   410 AKKKTTTLK--KGEVIEQNM------------DSLE--YSSEDEL-------------EDIRDTA 445
            .|:|....|  ..:.:|..:            |:|.  |:|::|:             .|..|..
plant   100 PKEKLERYKDDDDDPVESYLKAKKDLGLTLAADALNAGYNSDEEVYAAAKAVDAGMLDYDSDDNP 164

  Fly   446 VNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIK 510
            :.:..:..:.:..:||||:.|.|..|:||.|:..::.||..:...||..| ||:|.|....:|:|
plant   165 IVVDKRKIEPITALDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRL-GIRVSGFDVHRPVK 228

  Fly   511 TWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQ 575
            |:..||.|.:.|..:::..:||||.|||||:|.::||||:|||||||||||.||:|||..||:||
plant   229 TFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQ 293

  Fly   576 PSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCT 640
            |.::..:|.|.:|.||||||..||..:.:||||:.|||...||||....||..|||.|.||:|.|
plant   294 PELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVAT 358

  Fly   641 PGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQM 705
            |||:||||..   :...:.|.:|:||||||||||:||||||..|:..:||||||::||||.|.::
plant   359 PGRLIDMLKM---KALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKV 420

  Fly   706 EALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDA-KFFKLLELLGIYQEAGSIIVFVDKQEN 769
            |.|||.||..||.|.||...:..:::.|.|.::..|| |...|||.|....:.|.::||..|:..
plant   421 EKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKAT 485

  Fly   770 ADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDV 834
            .|.:...|...|:...:|||..||..|..|:..||||...:||||.|||||||:|.|..|||||:
plant   486 VDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDI 550

  Fly   835 PNHYEDYVHRCGRTGRAG-KKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQ 898
            ....:.:|||.||||||| :.|.|||.:|..::|:||:::.::..:|..:|.||..|     |::
plant   551 AKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDL-----AMK 610

  Fly   899 EAEGKTVHTG--GGFSGKGFKFDEQEFNAAKESKKLQKAALGLADSDDEEDIEQDIDQQIEQIFA 961
            :...|:...|  ||..|:|         ....:|.::....||......|               
plant   611 DGRFKSKRDGRKGGKKGRG---------GGGGNKGVRGVDFGLGIGFSSE--------------- 651

  Fly   962 AKRTVKDTSAAATAAAAAAAAAAAAAAAVSGANPALASAAAQAAAAAAAANIAIAA--ASAPAAA 1024
            :.||            .::.||.:.:.|::.....:.:....:..||..:|....|  ...|:..
plant   652 SSRT------------PSSKAAPSRSGAINSVRTGVMAQFKNSFVAATPSNPQNQAYPNKRPSLM 704

  Fly  1025 GGAPSVAMGGALSSDKLE----LAKRLASKINSSKN 1056
            |......:||.:...:.:    ...:.||..|||:|
plant   705 GFVSGGTIGGDMGRTQSQAPPVAPTQNASSHNSSQN 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6227NP_573020.2 SrmB 482..967 CDD:223587 212/488 (43%)
DEADc 516..719 CDD:238167 115/202 (57%)
HELICc 733..860 CDD:238034 58/128 (45%)
AT2G47330NP_566099.1 DEADc 230..435 CDD:238167 116/207 (56%)
DEXDc 243..449 CDD:214692 115/208 (55%)
HELICc 445..577 CDD:238034 58/131 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245118at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.