DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and AT2G42520

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_181780.1 Gene:AT2G42520 / 818852 AraportID:AT2G42520 Length:633 Species:Arabidopsis thaliana


Alignment Length:468 Identity:176/468 - (37%)
Similarity:260/468 - (55%) Gaps:27/468 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 PFRKNFYVEVPELTRM--TAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGF 530
            ||..:.....|..|..  |..:.:.| .|:. |:..|...|.|:.|:|:..:.:.....:||..:
plant   117 PFENDDSEPEPAFTEQDNTVINFDAY-EDIP-IETSGDNVPPPVNTFAEIDLGEALNLNIRRCKY 179

  Fly   531 EKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGA-----IAIIMA 590
            .||||:|..|||.::.||||:..|:||||||.||..|:...|:....::...|:     :|:|::
plant   180 VKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILS 244

  Fly   591 PTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRV 655
            |||||..||..:.:|||...|::.|..||||.|::|:.||:||.:|:|.||||:.|:|  ...||
plant   245 PTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLL--ERARV 307

  Fly   656 TNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNV----RPDRQTVMFSATFPRQMEALARRILKKP 716
             :::.:.::.|||||||.|||||||:.:|::.:    |..|||::|||||||:::.||...|...
plant   308 -SMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANY 371

  Fly   717 IEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELL------GIYQEAGSIIVFVDKQENADILLR 775
            |.:.||........:.|.|..:.|..|...|::||      ||..:....:|||:.:..||.|..
plant   372 IFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLEN 436

  Fly   776 DLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYED 840
            .|....:|..|:||...|.:|:..:..||||:..:|:||.|||||||:..:..|||:|:||..:|
plant   437 WLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 501

  Fly   841 YVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQE-AEGKT 904
            ||||.||||||||.|.|..|.....:..|..:...|..:...:|..|    |.|.:... ..||.
plant   502 YVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPEWL----TRYASRSSFGGGKN 562

  Fly   905 VHTGGGFSGKGFK 917
            ..:||.|.|:.|:
plant   563 RRSGGRFGGRDFR 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120 169/447 (38%)
KH-I_DDX46 1121..1223 CDD:411901
AT2G42520NP_181780.1 SrmB 160..546 CDD:440279 154/388 (40%)
Blue background indicates that the domain is not in the aligned region.

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