DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6227 and Ddx42

DIOPT Version :9

Sequence 1:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_082350.3 Gene:Ddx42 / 72047 MGIID:1919297 Length:929 Species:Mus musculus


Alignment Length:832 Identity:284/832 - (34%)
Similarity:422/832 - (50%) Gaps:94/832 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 FGKLGIGLATKAEADI------------------KKEPPPVDTKKEIKKKPEPVAAKMEIVEEPT 335
            ||...|....|.||.:                  |..||.:.:..:|..|......:....|:. 
Mouse    16 FGGFAISAGKKEEAKLPQQSHSAFGAASSSSGFGKSAPPQLPSFYKIGSKRANFDEENAYFEDE- 79

  Fly   336 VAAGEKTKKEPEQPHVGAKSEPEVEDKPQPEAEPEDEIDPLDAYMQEVNN----EMRRVNNFVNP 396
                |:.....:.|::.|::.|..:......|:.:.:.|||:|:|.||.:    :|:|:......
Mouse    80 ----EEDSSNVDLPYIPAENSPTRQQFHSKPADSDSDDDPLEAFMAEVEDQAARDMKRLEEKDKE 140

  Fly   397 PAKSQGV-----------VILTGVAKKKTTTLKKGEVIEQNMDSLEYSSEDELEDIRDTAVNLAM 450
            ....:|:           .....:|:..|.    |.|.|:..|:|||.|:       ...:..:.
Mouse   141 RKNVKGIRDDIEEEDDQEAYFRYMAENPTA----GVVQEEEEDNLEYDSD-------GNPIAPSK 194

  Fly   451 KHRKELAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQC 515
            |....|..||||.:.|.||.||||.|..|:|.:|...:...|..| .::|.|...|:|..::|..
Mouse   195 KIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKL-NLRVSGAAPPRPGSSFAHF 258

  Fly   516 GVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMED 580
            |..::.|..:|:..:.:|||||||.:|..:||||:|||||||||||.|||.||..||:||..:|.
Mouse   259 GFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323

  Fly   581 GDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMI 645
            |||.||:|:.||||||.||..:.::|.|:..||.|.||||..:.||...|:.||||:||||||:|
Mouse   324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLI 388

  Fly   646 DMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALAR 710
            |.:   ..:.|||:||:|:|.||||||||||||.||..|..:|||||||::|||||.:::|.|||
Mouse   389 DHV---KKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLAR 450

  Fly   711 RILKKPIEVIVGGRSVVCKEVEQHVVILND-DAKFFKLLELLGIYQEAGSIIVFVDKQENADILL 774
            .||..||.|:.|......::|.|.|.||:. .:|:..|...|..:..:||:::||.|:.||:.|.
Mouse   451 DILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELA 515

  Fly   775 RDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYE 839
            .:|.:..:....|||.:||.:|:..|.|||...:.:|:||.|||||||:..:..|:||||....:
Mouse   516 SNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDID 580

  Fly   840 DYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMD-----LSGTLIPAELQALWTEYKALQE 899
            .:.||.|||||||:||.|||.:||:.|.:|||::|.::     :|..|:...:|..|......:.
Mouse   581 THTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKG 645

  Fly   900 AEGKTVHTGGGFSGKGFKFDEQEFNAAKESKKLQKAALGLADSDDEEDIEQDIDQQIEQIFAAKR 964
            .:||.::.|||  |.|::               ::..||..:||...:  .::....|....:..
Mouse   646 GKGKKLNIGGG--GLGYR---------------ERPGLGSENSDRGNN--NNVMSNYEAYKPSTG 691

  Fly   965 TVKDTSAAATAAAAAAAAAAAAAAAVSGANPALASAAAQAAAAAAAANIAIAAASAPAAAGGAPS 1029
            .:.|...|..||..:...:...||::|......:||.|....:|.:.|      |.|.      :
Mouse   692 AMGDRLTAMKAAFQSQYKSHFVAASLSNQKAGTSSAGASGWTSAGSLN------SVPT------N 744

  Fly  1030 VAMGGALSSDK-LELAKRLASKINSSKNLDTKGSVVTVEPMIKGPHVTGAAA 1080
            .|..|..|.|. :..:.:.....|:|.|:   .|.....|.|....|...|:
Mouse   745 SAQQGHNSPDNPMTSSTKNIPGFNNSGNI---SSAPVTYPSIGAQGVNNTAS 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6227NP_573020.2 SrmB 482..967 CDD:223587 205/490 (42%)
DEADc 516..719 CDD:238167 116/202 (57%)
HELICc 733..860 CDD:238034 54/127 (43%)
Ddx42NP_082350.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..119 17/98 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..203 5/27 (19%)
Q motif 253..281 8/27 (30%)
PRK10590 254..678 CDD:236722 197/445 (44%)
DEADc 255..459 CDD:238167 117/206 (57%)
DEAD box 407..410 2/2 (100%)
HELICc 470..601 CDD:238034 55/130 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 662..682 4/21 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 723..929 19/86 (22%)
Necessary for interaction with TP53BP2. /evidence=ECO:0000250 739..828 15/70 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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