DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and Ddx42

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_082350.3 Gene:Ddx42 / 72047 MGIID:1919297 Length:929 Species:Mus musculus


Alignment Length:832 Identity:284/832 - (34%)
Similarity:422/832 - (50%) Gaps:94/832 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 FGKLGIGLATKAEADI------------------KKEPPPVDTKKEIKKKPEPVAAKMEIVEEPT 335
            ||...|....|.||.:                  |..||.:.:..:|..|......:....|:. 
Mouse    16 FGGFAISAGKKEEAKLPQQSHSAFGAASSSSGFGKSAPPQLPSFYKIGSKRANFDEENAYFEDE- 79

  Fly   336 VAAGEKTKKEPEQPHVGAKSEPEVEDKPQPEAEPEDEIDPLDAYMQEVNN----EMRRVNNFVNP 396
                |:.....:.|::.|::.|..:......|:.:.:.|||:|:|.||.:    :|:|:......
Mouse    80 ----EEDSSNVDLPYIPAENSPTRQQFHSKPADSDSDDDPLEAFMAEVEDQAARDMKRLEEKDKE 140

  Fly   397 PAKSQGV-----------VILTGVAKKKTTTLKKGEVIEQNMDSLEYSSEDELEDIRDTAVNLAM 450
            ....:|:           .....:|:..|.    |.|.|:..|:|||.|:       ...:..:.
Mouse   141 RKNVKGIRDDIEEEDDQEAYFRYMAENPTA----GVVQEEEEDNLEYDSD-------GNPIAPSK 194

  Fly   451 KHRKELAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQC 515
            |....|..||||.:.|.||.||||.|..|:|.:|...:...|..| .::|.|...|:|..::|..
Mouse   195 KIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKL-NLRVSGAAPPRPGSSFAHF 258

  Fly   516 GVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMED 580
            |..::.|..:|:..:.:|||||||.:|..:||||:|||||||||||.|||.||..||:||..:|.
Mouse   259 GFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323

  Fly   581 GDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMI 645
            |||.||:|:.||||||.||..:.::|.|:..||.|.||||..:.||...|:.||||:||||||:|
Mouse   324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLI 388

  Fly   646 DMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALAR 710
            |.:   ..:.|||:||:|:|.||||||||||||.||..|..:|||||||::|||||.:::|.|||
Mouse   389 DHV---KKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLAR 450

  Fly   711 RILKKPIEVIVGGRSVVCKEVEQHVVILND-DAKFFKLLELLGIYQEAGSIIVFVDKQENADILL 774
            .||..||.|:.|......::|.|.|.||:. .:|:..|...|..:..:||:::||.|:.||:.|.
Mouse   451 DILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELA 515

  Fly   775 RDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYE 839
            .:|.:..:....|||.:||.:|:..|.|||...:.:|:||.|||||||:..:..|:||||....:
Mouse   516 SNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDID 580

  Fly   840 DYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMD-----LSGTLIPAELQALWTEYKALQE 899
            .:.||.|||||||:||.|||.:||:.|.:|||::|.::     :|..|:...:|..|......:.
Mouse   581 THTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKG 645

  Fly   900 AEGKTVHTGGGFSGKGFKFDEQEFNAAKESKKLQKAALGLADSDDEEDIEQDIDQQIEQIFAAKR 964
            .:||.::.|||  |.|::               ::..||..:||...:  .::....|....:..
Mouse   646 GKGKKLNIGGG--GLGYR---------------ERPGLGSENSDRGNN--NNVMSNYEAYKPSTG 691

  Fly   965 TVKDTSAAATAAAAAAAAAAAAAAAVSGANPALASAAAQAAAAAAAANIAIAAASAPAAAGGAPS 1029
            .:.|...|..||..:...:...||::|......:||.|....:|.:.|      |.|.      :
Mouse   692 AMGDRLTAMKAAFQSQYKSHFVAASLSNQKAGTSSAGASGWTSAGSLN------SVPT------N 744

  Fly  1030 VAMGGALSSDK-LELAKRLASKINSSKNLDTKGSVVTVEPMIKGPHVTGAAA 1080
            .|..|..|.|. :..:.:.....|:|.|:   .|.....|.|....|...|:
Mouse   745 SAQQGHNSPDNPMTSSTKNIPGFNNSGNI---SSAPVTYPSIGAQGVNNTAS 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653 20/109 (18%)
DEAD-like_helicase_N 454..899 CDD:475120 208/450 (46%)
KH-I_DDX46 1121..1223 CDD:411901
Ddx42NP_082350.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..119 17/98 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..203 5/27 (19%)
Q motif 253..281 8/27 (30%)
SrmB 254..678 CDD:440279 197/445 (44%)
DEAD box 407..410 2/2 (100%)
dermokine <644..>889 CDD:455732 38/184 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 662..682 4/21 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 723..929 19/86 (22%)
Necessary for interaction with TP53BP2. /evidence=ECO:0000250|UniProtKB:Q86XP3 739..828 15/70 (21%)
Blue background indicates that the domain is not in the aligned region.

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