DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prp5 and ddx3xa

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:XP_021334401.1 Gene:ddx3xa / 566947 ZFINID:ZDB-GENE-030131-1565 Length:841 Species:Danio rerio


Alignment Length:456 Identity:167/456 - (36%)
Similarity:262/456 - (57%) Gaps:27/456 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 TAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGR 548
            |..:.||| .|:. ::..|...|..|:::....:.:..|..:....:.:|||:|..|||.|.:.|
Zfish   331 TGINFEKY-DDIP-VEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPVQKYAIPIIKTKR 393

  Fly   549 DLIGIAKTGSGKTLAFILPMFRHILDQ----------PSMEDGDG--------AIAIIMAPTREL 595
            ||:..|:||||||.||:||:...|..:          .|.:..:|        .|::::||||||
Zfish   394 DLMACAQTGSGKTAAFLLPVLSQIYSEGPGEALQATKASTQQENGKYVRRKQYPISLVLAPTREL 458

  Fly   596 CMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 660
            .:||..:.|||:....:||..||||..|.:||.:|:||..::|.||||::||:  ..|:: .|..
Zfish   459 ALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMM--ERGKI-GLDY 520

  Fly   661 VTYVVLDEADRMFDMGFEPQVMRII--DNVRP--DRQTVMFSATFPRQMEALARRILKKPIEVIV 721
            ..|:||||||||.|||||||:.||:  |.:.|  .|||:|||||||::::.|||..|::.|.:.|
Zfish   521 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSATFPKEIQILARDFLEEYIFLAV 585

  Fly   722 GGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMS 786
            |......:.:.|.||.:.::.|...||:||....:....:|||:.::.||.|...|.:..|.|.|
Zfish   586 GRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTS 650

  Fly   787 LHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRA 851
            :||...|.||:..:..|:||:..:::||:|||||||:.::..|:|:|:|:..|:||||.|||||.
Zfish   651 IHGDRSQRDREEALHQFRSGRCPIMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRV 715

  Fly   852 GKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGF 916
            |..|.|.:|...:.|....|::..:..:...:|:.|:.|..|::......|:.....|||..:.:
Zfish   716 GNLGLATSFYNDKNSNITKDLLDILVEAKQEVPSWLENLAYEHQHKSTNRGRPKRFSGGFGARDY 780

  Fly   917 K 917
            :
Zfish   781 R 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120 163/436 (37%)
KH-I_DDX46 1121..1223 CDD:411901
ddx3xaXP_021334401.1 DEADc_DDX3 335..590 CDD:350809 103/259 (40%)
SF2_C_DEAD 595..725 CDD:350174 52/129 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.