Protein Alignment CG6227 and abs

DIOPT Version :9

• Sequence 1: NP_573020.2
• Gene: CG6227 / 32464
• FlyBaseID: FBgn0030631
• Length: 1224
• Species: Drosophila melanogaster
• Sequence 2: NP_524220.1
• Gene: abs / 40530
• FlyBaseID: FBgn0015331
• Length: 619
• Species: Drosophila melanogaster
• Alignment Length: 633
• Identity: 196/633 - (30%)
• Similarity: 309/633 - (48%)
• Gaps: 88/633 - (13%)

  Fly   301 EADIKKEP--PPVDTKKEIKKKPEPVAAKMEIVEEPTVAAGEKTKKEPEQPHVGAKSEPEVEDKP 363
            |.|:..|.  |.|..|:..|:....:...:::|.|..                          :|
  Fly    16 EGDLDNEDYVPYVPVKERKKQHMIKLGRIVQLVSETA--------------------------QP 54

  Fly   364 QPEAEPEDEIDPLDAYMQEVNNEMRRVNNFVNPPAKSQGVVILTGVAKKKTTTLKKGEVIE-QNM 427
            :..:|.|:|.|...|:  :|....|:.|           :.:|     .:.|.|||  :.| :.:
  Fly    55 KSSSENENEDDSQGAH--DVETWGRKYN-----------ISLL-----DQHTELKK--IAEAKKL 99

  Fly   428 DSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYR 492
            .::|....:|.:.:...|...|:....||||    .:.|....|..:.....:..|:..:.|..|
  Fly   100 SAVEKQLREEEKIMESIAQQKALMGVAELAK----GIQYEQPIKTAWKPPRYIREMSEEEREAVR 160

  Fly   493 SDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTG 557
            .:|. |.|:|:....||:::.:....|..:..|...|.:.|||||.|.:|.:::||||||||.||
  Fly   161 HELR-ILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTG 224

  Fly   558 SGKTLAFILPMFRHILDQP---SMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSL------GLR 613
            |||||.|:||:....|:|.   ..|..:|...:|:.|:|||..|..:.|:.:||.|      .:|
  Fly   225 SGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIR 289

  Fly   614 PVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE 678
            .....||..:||.:..:.||..|:|.||||::|||   ..::..|....|:.:||||||.|||||
  Fly   290 SCLAMGGLPVSEALDVISRGVHIVVATPGRLMDML---DKKILTLDMCRYLCMDEADRMIDMGFE 351

  Fly   679 PQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAK 743
            ..|..|....:..|||::||||.|::::..||..|.||:.:.||........|.|.|..:..:||
  Fly   352 EDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAK 416

  Fly   744 FFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKV 808
            ...||:.|  .:.|..:::|.:|:::.|.:...|:......:::|||.||.:|...:..::.||.
  Fly   417 VVYLLDCL--QKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKK 479

  Fly   809 RLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFI--TPEQSRYAGD 871
            .:|:||.||::|||..::..|:|||:|:..|:||||.|||||:..||.|.|.|  |.|||
  Fly   480 DVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQS----- 539

  Fly   872 IIRAMDLSGTLIPAELQ--------ALWTEYKALQ--EAEGKTVHTGG 909
              ..:||...||..:.:        |..||::.|.  ::.|.| :.||
  Fly   540 --VLLDLKHLLIEGKQEVPDFLDELAPETEHQHLDLGDSHGCT-YCGG 584

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6227	NP_573020.2	SrmB	482..967	CDD:223587	162/449 (36%)
		DEADc	516..719	CDD:238167	86/211 (41%)
		HELICc	733..860	CDD:238034	46/126 (37%)
abs	NP_524220.1	DEADc	179..393	CDD:238167	86/216 (40%)
		DEXDc	192..397	CDD:214692	87/207 (42%)
		Helicase_C	414..523	CDD:278689	41/110 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451471
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840