DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prp5 and BoYb

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_649430.1 Gene:BoYb / 40512 FlyBaseID:FBgn0037205 Length:1059 Species:Drosophila melanogaster


Alignment Length:380 Identity:74/380 - (19%)
Similarity:147/380 - (38%) Gaps:68/380 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   507 KPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIM--SGRDLIGIAKTGSGKTLAFILPM- 568
            :|::.:|:..:....:|.:|.||..:...:|....|.:.  ||...:.:....||:|.|:|.|: 
  Fly    51 RPVRRFAEVSLLPDILETMRNLGLNRLLRLQSYTWPHLAGGSGHGAMIVGSPASGRTFAYIPPVC 115

  Fly   569 ----------------FRHILDQPSMEDGDGAIAIIMAP-------TRELCMQIGKDIRKFSKSL 610
                            ..|.:.||   |..|.||:|:.|       ...:|:.:   :||..|:.
  Fly   116 HAVSRALMDFTGQCEDVEHDISQP---DRYGPIALILVPDLRRVHQVSAMCLAL---LRKAHKND 174

  Fly   611 GLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR---VTYVVLDEADRM 672
            .:........|..|:...:|..|...:|.||.:::.......|    |.|   :.::|.|:.|.|
  Fly   175 SVTLALNVSSTKSSQFFLKLLNGVGCLVATPAQLVWFWQEAPG----LMRFPCLQFLVYDDVDLM 235

  Fly   673 FDMGFEPQVMRIIDNVRP---DRQTVMFSATFPRQMEALARRILKKPIEV--------IVGGRSV 726
            .....: .|.:::..:.|   ..|.||.|.::...:.:..|.:..||..|        :.||..:
  Fly   236 SREQLQ-DVQQVLQEILPLSHSPQVVMVSKSYCHTLMSKLRAVNDKPALVFGDILEAALYGGTRI 299

  Fly   727 VCKEVEQHVVILNDDAKFFKLLELL-GIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGG 790
                   .:.|:..:||...::::| ....|....::|.....:...|:..|....|.|:..:..
  Fly   300 -------RISIMRSEAKANAVVQMLQQCSPEEFRTVIFCSDDGDMQCLVAALEVQHYSCLPYYQT 357

  Fly   791 IDQFDRDSTIIDFKSGKVR----LLIATSVAARGLDVKDLILVVNYDVPNHYEDY 841
            .|...|...    .|.:.|    :|:.|..... ||::|...::::.:.:.:..:
  Fly   358 ADLEVRQQV----HSWQARSNGVILLCTDNCPE-LDIRDAHTIIHHSMSHSWSKF 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120 74/380 (19%)
KH-I_DDX46 1121..1223 CDD:411901
BoYbNP_649430.1 DEAD-like_helicase_N 104..>235 CDD:475120 32/140 (23%)
Tudor_SF 531..663 CDD:470623
PLN00203 <659..>749 CDD:215101
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.