DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6227 and Ddx1

DIOPT Version :9

Sequence 1:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster


Alignment Length:454 Identity:129/454 - (28%)
Similarity:188/454 - (41%) Gaps:97/454 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   547 GRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGA-IAIIMAPTRELCMQIGKDIRKFSKSL 610
            |...:|..:.|...:.|  .|:.......||.:....| .||||.|:|||..|....|.||...|
  Fly   251 GNGFVGACQAGPEHSKA--NPITGPAAGAPSAKPAPNAPQAIIMEPSRELAEQTYNQIEKFKYHL 313

  Fly   611 G---LRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRM 672
            .   :|.:.:.||..:.||.|:|.:|..|:|.||||:.:|:  |||.|. |....:.||||||.:
  Fly   314 SNPEVRSLLLIGGVRLEEQKAQLMQGTHIVVGTPGRLEEMI--NSGLVL-LTHCRFFVLDEADAL 375

  Fly   673 FDMGFEPQVMRI---IDNVRPD---RQTVMFSATFPR-QMEALARRILKKPIEVIVGGRSVVCKE 730
            ...|:...:.|:   |..:..|   .|.|:.|||... :::.:|.|::..|..|.:.|...| .|
  Fly   376 LKQGYTELIDRLHKQIPKITSDGRRLQMVVCSATLHAFEVKKMAERLMHFPTWVDLKGEDAV-PE 439

  Fly   731 VEQHVVILNDD----------------------------------AKFFKLLELLGIY------- 754
            ...|||.|.|.                                  ::..|||:  |.|       
  Fly   440 TVHHVVCLVDPQMDTTWQSLRQPIGTDGVHDRDNVHPGNHSKETLSQAVKLLK--GEYCVHAIDK 502

  Fly   755 QEAGSIIVFVDKQENADILLRDLMKAS---YPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSV 816
            ......|:|...:::.|.|.|.|.:..   |.|:.|||.....:|...:..||..:|:.||.|.|
  Fly   503 HNMDRAIIFCRTKQDCDNLERFLRQRGGKHYSCVCLHGDRKPQERKENLEMFKRQQVKFLICTDV 567

  Fly   817 AARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFI--TPEQSRYAGDIIRAMDLS 879
            ||||||:..|..::|..:|:...:||||.||.|||.:.|.|.:.:  .||:..|.|:..::...|
  Fly   568 AARGLDITGLPFMINVTLPDDKTNYVHRIGRVGRAERMGLAISLVATVPEKVWYHGEWCKSRGRS 632

  Fly   880 ---GTLIPAELQALW-TEYKALQEAE----------------------GKTVH------TGGGF 911
               ..|.......:| .|...|.|.|                      ||.|:      ||.|:
  Fly   633 CNNTNLTEVRGCCIWYNEPNLLAEVEDHLNITIQQVDKTMDVPVNDFDGKVVYGQKNLRTGSGY 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6227NP_573020.2 SrmB 482..967 CDD:223587 129/454 (28%)
DEADc 516..719 CDD:238167 59/182 (32%)
HELICc 733..860 CDD:238034 49/170 (29%)
Ddx1NP_524212.2 P-loop_NTPase 4..>62 CDD:304359
SPRY_DDX1 91..242 CDD:293933
SrmB 279..>612 CDD:223587 106/338 (31%)
P-loop_NTPase <280..426 CDD:304359 51/148 (34%)
Helicase_C 492..602 CDD:278689 37/111 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451473
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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