DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6227 and CG5589

DIOPT Version :9

Sequence 1:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_649009.1 Gene:CG5589 / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster


Alignment Length:675 Identity:178/675 - (26%)
Similarity:294/675 - (43%) Gaps:153/675 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 VAAG----EKTKKEPE-----QPHVGAKSEPEVEDKPQPEAEPEDEIDPLDAYMQEVNNEMRRVN 391
            :.||    :|:||||.     ||      .|||....:|....|.:.|..|.      .|.|.::
  Fly    10 ITAGVRFTKKSKKEPSSKQQLQP------LPEVSKHEEPVKSEESDKDDEDI------TEFRLLD 62

  Fly   392 -NFVNPPAKSQGVVILTGVAKKKTTTLKKGEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKE 455
             :..|.|.:.:       ..|:||.:.|:.|:            :...|:..:|           
  Fly    63 GDSSNQPKRKK-------PKKEKTLSPKELEI------------QKAAEEANET----------- 97

  Fly   456 LAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKK 520
                          ||.:                       ||:|.||..|.|:.::   |...:
  Fly    98 --------------RKQY-----------------------GIRVLGKNVPPPVDSF---GTLTR 122

  Fly   521 EMEVLRRL-------GFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM 578
            :.::|.||       .|:.|||||.||:|.::..|.|:..|.|||||||||:.|    |::....
  Fly   123 DFKMLPRLQQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTP----IINGLRA 183

  Fly   579 EDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAE------II 637
            ....|..|:::||||||..||.::..:.::..|||...:   :.:||  |:.|.|||      |:
  Fly   184 HKTTGLRALVLAPTRELAQQIYRECAELTRETGLRTHFI---SKVSE--AKQKHGAECKQRYDIL 243

  Fly   638 VCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG---FEPQVMRIIDNV-----RPDRQT 694
            |.||.| :..|......:.:|..|.:.|||||||:.:.|   |:.|    :|::     .|.:..
  Fly   244 VSTPNR-VRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQ----LDDIYAACSNPTKCV 303

  Fly   695 VMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEA-- 757
            ..||||:...:...|.|.||..:.:.:|.::...:.|:|.::.:..:..  ||:.:..:.::.  
  Fly   304 AFFSATYTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGG--KLVAIRDLVRQGLQ 366

  Fly   758 GSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLD 822
            ..::|||..:|.|..|..:|:........:|....|..||:.:..|:.|.:.:||.|.:..||:|
  Fly   367 PPVLVFVQSKERAKQLFEELLYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGID 431

  Fly   823 VKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAEL 887
            .|.:.||:|||.|.....|:||.|||||||:.|.|.||.|.|.:.....|...:..||..:|..:
  Fly   432 FKGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGIALIIKNSGGTVPEYM 496

  Fly   888 QALWTEYKALQEAEGK----------TVHTGGGFSGKGFKFDEQEFNAAKESKKLQKAALGLADS 942
                .:.|.::::|.|          .:.|......||   ||:.     :|.||:|........
  Fly   497 ----LQMKKVRKSEAKMRAKKPLDREDISTKIRPETKG---DEKH-----KSTKLKKVERTEKIL 549

  Fly   943 DDEEDIEQDIDQQIEQIFAAKRTVK 967
            .:.:..|:|::.:.:::...|..:|
  Fly   550 KNRKGYEKDLNSKQKKLGNIKTELK 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6227NP_573020.2 SrmB 482..967 CDD:223587 148/517 (29%)
DEADc 516..719 CDD:238167 75/223 (34%)
HELICc 733..860 CDD:238034 41/128 (32%)
CG5589NP_649009.1 SrmB 87..594 CDD:223587 153/579 (26%)
P-loop_NTPase 123..329 CDD:304359 74/219 (34%)
HELICc 349..469 CDD:238034 40/121 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451467
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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