DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6227 and CG10077

DIOPT Version :9

Sequence 1:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_001261491.1 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster


Alignment Length:498 Identity:191/498 - (38%)
Similarity:284/498 - (57%) Gaps:29/498 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   452 HRKELAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCG 516
            |...|.||..|.|...|||||||.....:...|..:.|.:.:..| |.:||...|.|...:.:.|
  Fly   100 HGAHLPKIVWSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNE-ITIKGDQVPTPSIEFEEGG 163

  Fly   517 VSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDG 581
            .....|..:|:.||.|||.||.|..|..||||||:|:|:||||||||::||...||.:||.:|.|
  Fly   164 FPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERG 228

  Fly   582 DGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMID 646
            ||.||:::||||||..||.:...:|..:..:|..|::||....:|..:|:||.||::.||||:||
  Fly   229 DGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLID 293

  Fly   647 MLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARR 711
            .|...:   |:|:|.||:||||||||.|||||||:.:|:..:|||||.:|:|||:|:::..||..
  Fly   294 FLERGT---TSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEE 355

  Fly   712 ILKKPIEVIVGGRSVVCK-EVEQHVVILNDDAKFFKLLELLG--IYQEAGSIIVFVDKQENADIL 773
            .|...|:|.:|..|:... .:.|.|.:.:::.|..||::||.  ..:.....|:||:.::..|.:
  Fly   356 FLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEI 420

  Fly   774 LRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHY 838
            .|::.:..:...::||...|.:||..:..|::|:..:|:||.||||||||.|:..|:|||.|::.
  Fly   421 TRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNS 485

  Fly   839 EDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQ-------------AL 890
            ||||||.|||||:...|:|||..|...:..|.|:|:.:..:...|..:|.             .:
  Fly   486 EDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMAMNGGYNKRGGGM 550

  Fly   891 WTEYKALQEAEGKTVHTGGGF---------SGKGFKFDEQEFN 924
            ...|:.....:|:....|||:         :|.|...:...||
  Fly   551 GGGYRGGNGYQGRNPQMGGGYNGGNNYRNNNGPGATMNRNSFN 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6227NP_573020.2 SrmB 482..967 CDD:223587 178/468 (38%)
DEADc 516..719 CDD:238167 101/202 (50%)
HELICc 733..860 CDD:238034 50/128 (39%)
CG10077NP_001261491.1 PTZ00110 49..544 CDD:240273 182/447 (41%)
DEADc 159..364 CDD:238167 101/207 (49%)
HELICc 375..507 CDD:238034 50/131 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451399
Domainoid 1 1.000 152 1.000 Domainoid score I185
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245118at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9750
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.