DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and Dbp80

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster


Alignment Length:559 Identity:132/559 - (23%)
Similarity:245/559 - (43%) Gaps:102/559 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   412 KKTTTLKKGEVIEQ-NMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYV 475
            ||....:..::::: |:||  .|.|:...|:.|.|                              
  Fly     6 KKAEDQEVSKLVDKLNLDS--KSGEETDFDVADPA------------------------------ 38

  Fly   476 EVPELTRMTAADVEKYRSDLEGIQVKGKGCP-KPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQ 539
            |...|.::....:...:..|: ||.|....| ..:||:....:....::.:..:||..|:.||..
  Fly    39 ETSLLIKILGKGLVNTKLSLD-IQQKNPNSPLHSVKTFEALHLKASLLKGIYAMGFNTPSKIQET 102

  Fly   540 AIPAIMSG--RDLIGIAKTGSGKTLAFILPMFRHI---LDQPSMEDGDGAIAIIMAPTRELCMQI 599
            |:|.:::.  :::|..:::|:|||.||:|.|...:   |:.|.:        :.::||.||.:|.
  Fly   103 ALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQV--------LCLSPTYELAIQT 159

  Fly   600 GK---DIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAE-IIVCTPGRMIDMLAANSGRVTNLRR 660
            |:   .:.:|.:.:.|| ..|.|     |::...|:..| |::.|||:::|.  ....|:.::::
  Fly   160 GEVAARMGQFCREIKLR-FAVRG-----EEVDRSKKIEEHILIGTPGKLLDW--GIKFRLFDMKK 216

  Fly   661 VTYVVLDEADRMF-DMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGR 724
            ::..||||||.|. ..|...|.:||...:.|..|.:.||||:.:::...||.|:..|..:.:...
  Fly   217 ISVFVLDEADVMIATQGHHDQCIRIHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMRE 281

  Fly   725 SVVCKEVEQHVV-ILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLH 788
            ....:.::|:.| ..|::.|:..:..:.|.. ..|..|:|...:..|..|...:....:....|.
  Fly   282 EESLENIKQYYVKCKNEEGKYNAIQNIYGCI-SVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLT 345

  Fly   789 GGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVP------NHYEDYVHRCGR 847
            |.:....|...:..|:||..::||.|::.:||:|::.:.:|||:|:|      ...|.|:||.||
  Fly   346 GDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGR 410

  Fly   848 TGRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFS 912
            |||.  :.||.|..:|        |......||.:                   ||.::.    |
  Fly   411 TGRF--EPSALTRNSP--------IFGVKAESGKI-------------------GKEINR----S 442

  Fly   913 GKGFKFDEQEFNAAKESKKLQKAALGLADSDDEEDIEQD 951
            ..|.:...:|....||:..|.|......:.|:..|::.:
  Fly   443 SSGAESGSREMPKEKENISLLKFFSLTGNLDEAWDVQSE 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120 111/462 (24%)
KH-I_DDX46 1121..1223 CDD:411901
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 59/212 (28%)
SF2_C_DEAD 288..414 CDD:350174 35/126 (28%)
Blue background indicates that the domain is not in the aligned region.

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