DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6227 and Dbp80

DIOPT Version :9

Sequence 1:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster


Alignment Length:559 Identity:132/559 - (23%)
Similarity:245/559 - (43%) Gaps:102/559 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   412 KKTTTLKKGEVIEQ-NMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNFYV 475
            ||....:..::::: |:||  .|.|:...|:.|.|                              
  Fly     6 KKAEDQEVSKLVDKLNLDS--KSGEETDFDVADPA------------------------------ 38

  Fly   476 EVPELTRMTAADVEKYRSDLEGIQVKGKGCP-KPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQ 539
            |...|.::....:...:..|: ||.|....| ..:||:....:....::.:..:||..|:.||..
  Fly    39 ETSLLIKILGKGLVNTKLSLD-IQQKNPNSPLHSVKTFEALHLKASLLKGIYAMGFNTPSKIQET 102

  Fly   540 AIPAIMSG--RDLIGIAKTGSGKTLAFILPMFRHI---LDQPSMEDGDGAIAIIMAPTRELCMQI 599
            |:|.:::.  :::|..:::|:|||.||:|.|...:   |:.|.:        :.::||.||.:|.
  Fly   103 ALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQV--------LCLSPTYELAIQT 159

  Fly   600 GK---DIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAE-IIVCTPGRMIDMLAANSGRVTNLRR 660
            |:   .:.:|.:.:.|| ..|.|     |::...|:..| |::.|||:::|.  ....|:.::::
  Fly   160 GEVAARMGQFCREIKLR-FAVRG-----EEVDRSKKIEEHILIGTPGKLLDW--GIKFRLFDMKK 216

  Fly   661 VTYVVLDEADRMF-DMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGR 724
            ::..||||||.|. ..|...|.:||...:.|..|.:.||||:.:::...||.|:..|..:.:...
  Fly   217 ISVFVLDEADVMIATQGHHDQCIRIHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMRE 281

  Fly   725 SVVCKEVEQHVV-ILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLH 788
            ....:.::|:.| ..|::.|:..:..:.|.. ..|..|:|...:..|..|...:....:....|.
  Fly   282 EESLENIKQYYVKCKNEEGKYNAIQNIYGCI-SVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLT 345

  Fly   789 GGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVP------NHYEDYVHRCGR 847
            |.:....|...:..|:||..::||.|::.:||:|::.:.:|||:|:|      ...|.|:||.||
  Fly   346 GDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGR 410

  Fly   848 TGRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFS 912
            |||.  :.||.|..:|        |......||.:                   ||.::.    |
  Fly   411 TGRF--EPSALTRNSP--------IFGVKAESGKI-------------------GKEINR----S 442

  Fly   913 GKGFKFDEQEFNAAKESKKLQKAALGLADSDDEEDIEQD 951
            ..|.:...:|....||:..|.|......:.|:..|::.:
  Fly   443 SSGAESGSREMPKEKENISLLKFFSLTGNLDEAWDVQSE 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6227NP_573020.2 SrmB 482..967 CDD:223587 120/488 (25%)
DEADc 516..719 CDD:238167 59/212 (28%)
HELICc 733..860 CDD:238034 38/133 (29%)
Dbp80NP_001263168.1 DEADc 75..277 CDD:238167 59/217 (27%)
DEXDc 88..291 CDD:214692 59/218 (27%)
Helicase_C 299..414 CDD:278689 32/115 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451454
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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