DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and ddx5

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_997777.2 Gene:ddx5 / 322206 ZFINID:ZDB-GENE-030131-925 Length:617 Species:Danio rerio


Alignment Length:457 Identity:197/457 - (43%)
Similarity:287/457 - (62%) Gaps:17/457 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 FRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKP 533
            |.||||.|.|::.|.:|.:||.||...| |.|||:..||||..:.:....|..|:|:.:..:..|
Zfish    56 FEKNFYQENPDVARRSAQEVEHYRRSKE-ITVKGRDGPKPIVKFHEANFPKYVMDVITKQNWTDP 119

  Fly   534 TPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQ 598
            ||||.|..|..:||:|::|||:|||||||:::||...||..||.:|.|||.|.:::||||||..|
Zfish   120 TPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGDGPICLVLAPTRELAQQ 184

  Fly   599 IGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 663
            :.:...::.|:..::..|:|||.....||.:|:||.||.:.||||:||.|.|..   |||||.||
Zfish   185 VQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGK---TNLRRCTY 246

  Fly   664 VVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVC 728
            :||||||||.|||||||:.:|:|.:||||||:|:|||:|:::..||...||:.|::.||...:..
Zfish   247 LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSA 311

  Fly   729 K-EVEQHVVILNDDAKFFKLLELLG--IYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGG 790
            . .:.|.|.:.||..|..||:.||.  :.::....|:||:.:...|.|.|.:.:..:|.|.:||.
Zfish   312 NHNILQIVDVCNDGEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGD 376

  Fly   791 IDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKG 855
            .:|.:||..:.:||.||..:||||.||:|||||:|:..|:|:|.||:.|||:||.|||.|:.|.|
Zfish   377 KNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTG 441

  Fly   856 SAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFDE 920
            :||||.||...:.|.|::..:..:...|..:|         :|.||.:...:.|| .|.|::.|.
Zfish   442 TAYTFFTPNNMKQAHDLVSVLREANQAINPKL---------IQMAEDRGGRSRGG-RGGGYRDDR 496

  Fly   921 QE 922
            ::
Zfish   497 RD 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120 189/432 (44%)
KH-I_DDX46 1121..1223 CDD:411901
ddx5NP_997777.2 DEAD-like_helicase_N 3..477 CDD:475120 190/433 (44%)
Blue background indicates that the domain is not in the aligned region.

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