DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6227 and ddx46

DIOPT Version :9

Sequence 1:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:XP_009294012.1 Gene:ddx46 / 321948 ZFINID:ZDB-GENE-030131-667 Length:1035 Species:Danio rerio


Alignment Length:1211 Identity:613/1211 - (50%)
Similarity:766/1211 - (63%) Gaps:197/1211 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RDNRHDSRSRDYDMGKSRNGGGGGAGGGSRNMREDRKRGKDMISDRGKRDDKRRKCSRSKDYEKD 97
            |::|| .|.|....|:|          |||:    :.|..|  |.|.|:||  |..||:      
Zfish     3 RESRH-YRKRSSSRGRS----------GSRS----KSRSPD--SKRSKKDD--RTASRT------ 42

  Fly    98 NSPHYRRLDKDRDRDRDRDRQREKEREREKEKEREKEKERERDKDRERDRQREKESDSRRAAAAA 162
               |.|| ::.|.|:|.|.|:|:::|...:::.|.:.:||.|.|.|.|.|.:||..:..:.|...
Zfish    43 ---HSRR-ERSRSRERRRSRERKRQRRSSRDRRRSRSRERRRSKSRSRGRSKEKPENGDQTADKK 103

  Fly   163 PLIIPLLSTSCSEEEVEEIDKEEQ---QRRLEQEMIKRRERIERWRAERKRDTKAAV--VAPSL- 221
            .:          :||.||...|:|   |..||:||.||:||:|:||.|:::.....:  :...| 
Zfish   104 KI----------KEEKEEEKPEDQDFDQNTLEEEMRKRKERVEKWREEQRKKAMENIGEIKKELE 158

  Fly   222 -VNSAKKWSLEDESEEDDSNPAPPLDSGKKDAEPDSPPSKFHSIRKRFDDDVVESKFSPVKRPTF 285
             :...|||||||:.::|:..|||        .|||.            ||:              
Zfish   159 EMKQGKKWSLEDDDDDDEEAPAP--------VEPDG------------DDE-------------- 189

  Fly   286 SKSFGKLGIGLATKAEADIKKEPPPVDTKKEIKKKPEPVAAKMEIVEEPTVAAGEKTKKEPEQPH 350
                                                          ||...||..:..:..|:..
Zfish   190 ----------------------------------------------EEQDKAAEAEESERMEEEE 208

  Fly   351 VGAKSEPEVEDKPQPEAEPEDEIDPLDAYMQEVNNEMRRVN----NFVNPPAKSQGVVILTGVAK 411
            ||                  :|:|||||||:||..|:::.|    ...|.......|..:..|.|
Zfish   209 VG------------------EEVDPLDAYMEEVKEEVKKFNMGTMKGANDKKGGMSVTKVVTVVK 255

  Fly   412 KKT---TTLKKGEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDHSSVTYAPFRKNF 473
            .|.   .|.||||::|.:.|::|||||:|..|::........|.||.|..:||..:.|.||||||
Zfish   256 TKKMPHATKKKGELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQYEPFRKNF 320

  Fly   474 YVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQC 538
            |||||||.||:..:|.:||.:||||.|||||||||||||.|||:|.|.:..|::..:|||||||.
Zfish   321 YVEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQA 385

  Fly   539 QAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDI 603
            |||||||||||||||||||||||:||:||||||||||..:.:.:|.:|:||.|||||.:||.|:.
Zfish   386 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAVIMTPTRELALQITKEC 450

  Fly   604 RKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDE 668
            :||||||.||.||||||||||||||||||||||||||||||||||.||:|||||||||||||:||
Zfish   451 KKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDE 515

  Fly   669 ADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQ 733
            ||||||||||||||||:||||||||||||||||||.|||||||||.||:||.||||||||.:|||
Zfish   516 ADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCSDVEQ 580

  Fly   734 HVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDS 798
            ||:::.::.||.||||:||.|||.||:|:||||||:||.||:||||||||||||||||||:||||
Zfish   581 HVIVIEEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDS 645

  Fly   799 TIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITP 863
            .|.|||:|..|||:||||||||||||.|||||||..||||||||||.|||||||.||.||||||.
Zfish   646 IINDFKNGACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 710

  Fly   864 EQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFDEQEFNAAKE 928
            .|:||:|||::|::|||:.:||||:.|||.:|..|:||||.:.:..|||||||||||.|...|.|
Zfish   711 GQARYSGDILKALELSGSSVPAELEQLWTNFKEQQKAEGKIIKSSSGFSGKGFKFDETEHALANE 775

  Fly   929 SKKLQKAALGLADSDDEEDIEQDIDQQIEQIFAAKRTVKDTSAAATAAAAAAAAAAAAAAAVSGA 993
            .||||||||||.|||| ||...|||:|||.:|.:|:.|||.||..:.:|.:|...:.:.:|||| 
Zfish   776 RKKLQKAALGLHDSDD-EDTALDIDEQIESMFNSKKRVKDFSAPGSVSAGSAGGVSGSVSAVSG- 838

  Fly   994 NPALASAAAQAAAAAAAANIAIAAASAPAAAGGAPSVAMGGALSSDKLELAKRLASKINSSKNLD 1058
                                 :.:.|.|:|.            :..|||:||:||.:|.:.|||.
Zfish   839 ---------------------LGSLSTPSAG------------NIQKLEIAKKLALRIQAQKNLG 870

  Fly  1059 TKGSVV---TVEPMIKGPHVTGAAATLLTARTVAEQMAAKLNNKLNYQPKE--DEEGLGPLVGGT 1118
            .:...|   ....:::|..:   .|..::|:|:|||.|.|:|.||||.|.|  :||........|
Zfish   871 AEAQDVMQQATNAILRGGTI---IAPSVSAKTIAEQQAEKINAKLNYTPVEKLEEERQAAEAAET 932

  Fly  1119 TNPFTKYEEELEINDFPQQARWKVTSKEALAQISEYSEAGLTVRGTYVPQGKNPPDGERKLYLAI 1183
            ..   :||||||||||||.|||||||||||.:|.|||||.:|:||||.|.||.|.:||||:||||
Zfish   933 VK---RYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAI 994

  Fly  1184 ESCSELAVQKAKREITRLIKEELLKLSSAHHVFNKGRYKVV 1224
            ||.:||||||||.||||||||||::|.:::...:||||||:
Zfish   995 ESANELAVQKAKAEITRLIKEELIRLQNSYQPTSKGRYKVL 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6227NP_573020.2 SrmB 482..967 CDD:223587 360/484 (74%)
DEADc 516..719 CDD:238167 162/202 (80%)
HELICc 733..860 CDD:238034 97/126 (77%)
ddx46XP_009294012.1 SrmB 348..811 CDD:223587 350/463 (76%)
DEADc 363..566 CDD:238167 162/202 (80%)
HELICc 577..707 CDD:238034 99/129 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 324 1.000 Domainoid score I1177
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5430
Inparanoid 1 1.050 1028 1.000 Inparanoid score I271
OMA 1 1.010 - - QHG54542
OrthoDB 1 1.010 - - D146665at33208
OrthoFinder 1 1.000 - - FOG0004627
OrthoInspector 1 1.000 - - oto39241
orthoMCL 1 0.900 - - OOG6_102375
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R985
SonicParanoid 1 1.000 - - X2240
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1414.010

Return to query results.
Submit another query.