DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and Ddx4

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:XP_063137794.1 Gene:Ddx4 / 310090 RGDID:1308793 Length:743 Species:Rattus norvegicus


Alignment Length:489 Identity:170/489 - (34%)
Similarity:267/489 - (54%) Gaps:47/489 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 ELAKIDHSSVTYAPFRKNFYVEVPE------LTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWA 513
            |.:.|....|||.|      ...||      ....|..:.:||.:.|  ::|.|...|..|.|:.
  Rat   250 ESSDIQGPKVTYIP------PPPPEDEDSIFAHYQTGINFDKYDTIL--VEVSGHDAPPAILTFE 306

  Fly   514 QCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM 578
            :..:.:.....:.:.|:.|.||:|..:||.:::||||:..|:||||||.||:||:..|:     |
  Rat   307 EANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHM-----M 366

  Fly   579 EDGDGAI---------AIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGA 634
            .||..|.         .||:||||||..||..:.||||....:|.|.:||||.....|.::.:|.
  Rat   367 RDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGC 431

  Fly   635 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIID----NVRPDRQTV 695
            .|:..||||::|::....   ..|::|.|:||||||||.||||.|::.::|.    ..:..|||:
  Rat   432 NILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTL 493

  Fly   696 MFSATFPRQMEALARRILKKP-IEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELL-GIYQEAG 758
            :||||||.:::.||...||.. :.|.||.....|::|:|.::.:...:|..||:|:| .|..|  
  Rat   494 LFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLVEILRNIGDE-- 556

  Fly   759 SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDV 823
            ..:|||:.::.||.:...|.:......|:||..:|.:|:..:.||:.||..:|:||||||||||:
  Rat   557 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 621

  Fly   824 KDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRY-AGDIIRAMDLSGTLIPAEL 887
            :::..|:|:|:|:..::||||.|||||.|..|.|.:|...|...: |..:::.:..:...:||.|
  Rat   622 ENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQQDVPAWL 686

  Fly   888 QAL-WTEY------KALQEAEGKTVHTGGGFSGK 914
            :.: ::.|      .:.:.|...:|.|...|.||
  Rat   687 EEIAFSSYAPPSFSNSTRGAVFASVDTRKNFQGK 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120 164/472 (35%)
KH-I_DDX46 1121..1223 CDD:411901
Ddx4XP_063137794.1 None
Blue background indicates that the domain is not in the aligned region.

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