DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and ddx4

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:XP_073769595.1 Gene:ddx4 / 30263 ZFINID:ZDB-GENE-990415-272 Length:796 Species:Danio rerio


Alignment Length:517 Identity:186/517 - (35%)
Similarity:279/517 - (53%) Gaps:81/517 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 TAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGR 548
            |..:.:||...|  :.|.|...||.|.|:.:.|:.....:.:.:.|:.||||:|...||.|.:||
Zfish   333 TGINFDKYDDIL--VDVSGSNPPKAIMTFEEAGLCDSLSKNVSKSGYVKPTPVQKHGIPIISAGR 395

  Fly   549 DLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAI---------AIIMAPTRELCMQIGKDIR 604
            ||:..|:||||||.||:||:.     |..|.||..|.         |||:||||||..||..:.|
Zfish   396 DLMACAQTGSGKTAAFLLPIL-----QRFMTDGVAASKFSEIQEPEAIIVAPTRELINQIYLEAR 455

  Fly   605 KFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEA 669
            ||:....:|||.||||......|.|:.:|..::..||||:.|::  ..|:: .|.:|.|:|||||
Zfish   456 KFAYGTCVRPVVVYGGINTGYTIREVLKGCNVLCATPGRLHDLI--GRGKI-GLSKVRYLVLDEA 517

  Fly   670 DRMFDMGFEPQVMRIIDN----VRPDRQTVMFSATFPRQMEALARRILKKPIEVI------VGGR 724
            |||.||||||::.:::.:    .:.:|||:|||||:|..::.:|...||  ::.|      ||| 
Zfish   518 DRMLDMGFEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAADFLK--VDYIFLAVGVVGG- 579

  Fly   725 SVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAGS--IIVFVDKQENADILLRDLMKASYPCMSL 787
              .|.:|||.:|.::..:|..:|||||   :..|:  .:|||:.:.:||.:...|.:......|:
Zfish   580 --ACSDVEQTIVQVDQYSKRDQLLELL---RATGNERTMVFVETKRSADFIATFLCQEKISTTSI 639

  Fly   788 HGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAG 852
            ||..:|.:|:..:.||:.|:..:|:||||||||||::.:..|||:|:|:..::||||.|||||.|
Zfish   640 HGDREQREREKALSDFRLGQCPVLVATSVAARGLDIEQVQHVVNFDMPSSIDEYVHRIGRTGRCG 704

  Fly   853 KKGSAYTFITPE-QSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGF 916
            ..|.|.:|..|| .:..|..:::.:..:..::|.     |.|..|. .|.|.|     ||:.:|.
Zfish   705 NTGRAVSFFNPESDTPLARSLVKVLSGAQQVVPK-----WLEEVAF-SAHGTT-----GFNPRGK 758

  Fly   917 KFDEQEFNAAKESKKLQKAALGLADSDDEEDIEQDIDQQIEQIFAAKRTVKDTSAAATAAAA 978
            .|      |:.:|:|      |.:...||....|                  |||.:.||||
Zfish   759 VF------ASTDSRK------GGSFKSDEPPPSQ------------------TSAPSAAAAA 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120 165/436 (38%)
KH-I_DDX46 1121..1223 CDD:411901
ddx4XP_073769595.1 None
Blue background indicates that the domain is not in the aligned region.

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