DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6227 and prp11

DIOPT Version :9

Sequence 1:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_587856.1 Gene:prp11 / 2538936 PomBaseID:SPCC10H11.01 Length:1014 Species:Schizosaccharomyces pombe


Alignment Length:1272 Identity:457/1272 - (35%)
Similarity:626/1272 - (49%) Gaps:319/1272 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RERDRERERERDRERERDRDRERDNRHDSRSRDYDMGKSRNGGGGGAGGGSRNMREDRKRGKDMI 75
            |.|.|...| |...|||...|:.|:..|.:...|:                        |..|.:
pombe     4 RTRSRSPPR-RSYNRERRDYRKYDDSEDQKGARYN------------------------RYVDDV 43

  Fly    76 SDRGKRDDKRRKCSRSKDYEKDNS-PHYRRLDKDRDRDRDRDRQREKE-------REREKEKERE 132
            |.|..|.|..|. ..|....:||| .|.:...:.|.::|||:..|.|.       |.......|.
pombe    44 SSRRDRHDSFRS-HESNKIRRDNSWKHDKYSYEKRYQERDREYARSKNIPDQYIGRSPRPTSHRH 107

  Fly   133 KEKERERDKDRERDR----------------QREKESDSRRAAAAAPLIIPLLSTSCSEEEVEEI 181
            .| |:|.|...:.|.                :|.:...:.|..|:       ||.|..:.|...:
pombe   108 AE-EKEVDNKTKSDETNPVLQGSATEIKPQPRRSRFDRTERVGAS-------LSVSEIQSENPRV 164

  Fly   182 D--------KEEQQRRLEQ----------EMIKRRERIERWRAERKRDTKAAVVAPSLVNSAKKW 228
            |        :...||..|:          :::.|.||:..|:..:.:.           .::|| 
pombe   165 DVIPKDKAVENNHQRNAEKPVASDKITDAKLLARLERVRAWKESKAKQ-----------EASKK- 217

  Fly   229 SLEDESEEDDSNPAPPLDSGKKDAEPDSPPSKFHSIRKRFDDDVVESKFSPVKRPTFSKSFGKLG 293
                  ||...|..|.:.:..::|.|.:..|.|...|:                           
pombe   218 ------EEHKLNTKPQVTAKDQNAMPSTGISGFEINRQ--------------------------- 249

  Fly   294 IGLATKAEADIKKEPPPVDTKKEIKKKPEPVAAKMEIVEEPTVAAGEKTKKEPEQPHVGAKSEPE 358
                 |..:|:|:     :.:..:..:..|....:|..:|        ...:.::..:|.:....
pombe   250 -----KDTSDMKR-----NNRVHMDDEDGPRRMNLEDYQE--------LWDQEDRGMLGNEQAAS 296

  Fly   359 VEDKPQPEAEPEDEIDPLDAYMQEVNNEMRRVNNFVNPPAKSQGVVILTGVAKKKTTTLKKG--- 420
            :|         |||:|||||||..                       |.|.    |.|::.|   
pombe   297 ME---------EDEVDPLDAYMAS-----------------------LVGT----TDTIRPGLLN 325

  Fly   421 -EVIEQNMDSLEYSSEDELEDIRDTAVNLAMKH--RKELAKIDHSSVTYAPFRKNFYVEVPELTR 482
             |||:.|.:..|.....|..:..:..:.||.|.  :|::..:|||.:.|..|:|:||||..||..
pombe   326 TEVIDPNANDDERMVISETLEEEENLLALAAKRSKKKDVITVDHSKINYEDFKKDFYVEPEELKN 390

  Fly   483 MTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSG 547
            ::.|:|::.|:.|:||:::|..||||:.:|:|||:|.:.:.|:..||:||||.||.||||||.||
pombe   391 LSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSG 455

  Fly   548 RDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGL 612
            ||:||:||||||||:||:|||||||.||..::.|:|.|||||.|||||.:||.::.:.|.|.|.:
pombe   456 RDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNI 520

  Fly   613 RPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGF 677
            |..|.|||..|.:|||:|||||||:|||||||||:|:||:||||||.|.||:||||||||||:||
pombe   521 RACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGF 585

  Fly   678 EPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDA 742
            ||||||||:|:|||||||:|||||||.||||||::||||:|:.|||||||..||||.|.:..:::
pombe   586 EPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEES 650

  Fly   743 KFFKLLELLG-IYQEAGSI--IVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFK 804
            ||.:|||||| :|.....:  :||||:||:||.||.||||..|...|:|||.||.||||||.|:|
pombe   651 KFSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYK 715

  Fly   805 SGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYA 869
            :|...:||||||.|||||||.|.||||||.|||.||||||.|||||||..|.|.|||||||.:||
pombe   716 AGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYA 780

  Fly   870 GDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFDEQEFNAAKESKKLQK 934
            .||.:|:.:|...:|.|||.|.:::....:| ||....||||.|||....::..||   .:|:|:
pombe   781 VDIAKALKMSKQPVPKELQTLASQFLEKVKA-GKEKAAGGGFGGKGLSRLDETRNA---ERKMQR 841

  Fly   935 AALGLADSDDEEDIEQDIDQQ--IEQIFAAKRTVKDTSAAATAAAAAAAAAAAAAAAVSGANPAL 997
            .|.|    :||||:|.:.:.:  :|:|...|.|                           .:|.|
pombe   842 KAYG----EDEEDVETEAEAKSPLEKITPEKST---------------------------GDPTL 875

  Fly   998 ASAAAQAAAAAAAANIAIAAASAPAAAGGAPSVAMGGALSSDKLELAKRLASKINSSKNLDTKGS 1062
            ....|                            |:||                            
pombe   876 DRVRA----------------------------AVGG---------------------------- 884

  Fly  1063 VVTVEPMIKGPHVTGAAATLLTARTVAEQMAAKLNNKLNYQP----KEDEEGLGPLVGGTTNPFT 1123
                                :.||..|.|.|.  :|||. ||    |.|.:              
pombe   885 --------------------IAARAFANQTAQ--SNKLT-QPISIIKTDGD-------------- 912

  Fly  1124 KYEEELEINDFPQQARWKVTSKEALAQISEYSEAGLTVRGTYVPQGKNPPDGERKLYLAIESCSE 1188
            :|:.::||||:||||||.||:...:..::|.:...:|.:|.:...||||..||.||||.||..||
pombe   913 EYKAKMEINDYPQQARWAVTNNTNIVHVTELTGTSITTKGNFYLPGKNPEPGEEKLYLWIEGPSE 977

  Fly  1189 LAVQKAKREITRLIKEEL-LKLSSAHHVFNKGRYKVV 1224
            |.|.:|..|:.||:.|.: ..|...:.....|||.||
pombe   978 LVVNRAITELRRLLLEGINHSLEGGNKPSASGRYTVV 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6227NP_573020.2 SrmB 482..967 CDD:223587 288/489 (59%)
DEADc 516..719 CDD:238167 141/202 (70%)
HELICc 733..860 CDD:238034 79/129 (61%)
prp11NP_587856.1 SrmB 395..868 CDD:223587 285/480 (59%)
DEADc 420..628 CDD:238167 145/207 (70%)
Helicase_C 649..763 CDD:278689 73/113 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 259 1.000 Domainoid score I377
eggNOG 1 0.900 - - E2759_KOG0334
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5430
Inparanoid 1 1.050 695 1.000 Inparanoid score I105
OMA 1 1.010 - - QHG54542
OrthoFinder 1 1.000 - - FOG0004627
OrthoInspector 1 1.000 - - oto101341
orthoMCL 1 0.900 - - OOG6_102375
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R985
SonicParanoid 1 1.000 - - X2240
TreeFam 1 0.960 - -
1413.860

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