DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6227 and ddx-46

DIOPT Version :9

Sequence 1:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_001033411.1 Gene:ddx-46 / 176943 WormBaseID:WBGene00018776 Length:970 Species:Caenorhabditis elegans


Alignment Length:1169 Identity:494/1169 - (42%)
Similarity:677/1169 - (57%) Gaps:224/1169 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 RGKRDDKRRKCSRSKDYEKDNSPHYRRLDKDRD-RDRDRDRQREKEREREKEKEREKEKERERDK 141
            ||:..:.:||.||||:.::..|...|...:.|: |||||||:|.:||:.::||.|::||:|:.:|
 Worm     3 RGEHKEHKRKRSRSKERKRSRSRSPRGSREHREHRDRDRDRERRRERDTDREKTRDREKQRDAEK 67

  Fly   142 DRERDRQREKESDSRRAAAAAPLIIPLLSTSCSEEEVEEIDKEEQQRRLEQEMI----KRRERIE 202
                  ::||||                .|:..|.|....|.||..:..|.|::    :||..:|
 Worm    68 ------KKEKES----------------KTAIFEMEESRNDTEEVMKMKEAELLQGVERRRRNVE 110

  Fly   203 RWRAERKRDTKAAVVAPSLVNSAKK-WSLEDESEEDDSNPAPPLDSGKKDAEPDSPPSKFHSIRK 266
            :|||::|::........|...|.|| |:||||.:||                             
 Worm   111 KWRAQKKKEELDLQSEQSDEKSEKKPWNLEDEDDED----------------------------- 146

  Fly   267 RFDDDVVESKFSPVKRPTFSKSFGKLGIGLATKAEADIKKEPPPVDTKKEIKKKPEPVAAKMEIV 331
                                              |.|||.|                     .|.
 Worm   147 ----------------------------------EFDIKNE---------------------GIS 156

  Fly   332 EEPTVAAGEKTKKEPEQPHVGAKSEPEVEDKPQPEAEPEDEIDPLDAYMQEVNNEMRRVNNFVNP 396
            ||..|...||.:|                      .:.:||.|||||:|:|:..:..:...  |.
 Worm   157 EENPVKMEEKVEK----------------------MDTDDEEDPLDAFMKEIATKNAKKTG--NS 197

  Fly   397 PAKSQGVVILTGVAKKKTTTLKKGEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDH 461
            ..|:.|:|.:....|.:.   :||:|:| |.|:::...:|  .||...|.:|..|.|. ||:.||
 Worm   198 TQKASGIVTIVQEEKPEP---EKGQVLE-NEDNMDMVIDD--FDIETAAASLCHKGRM-LAQTDH 255

  Fly   462 SSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLR 526
            |.|.|..|:||||:|..|:.|||.|:|:.||.:|:.|.|||..|||||||||||||:.|.|.||:
 Worm   256 SKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLK 320

  Fly   527 RLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAP 591
            :..:.|||.||.||||:||||||:||||||||||||||:|||||||||||.:|:|||.||:|:||
 Worm   321 KFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAP 385

  Fly   592 TRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 656
            ||||.||..|:..||:|.|||:..|.|||.|||||||:|||||||:|||||||||:||||||:||
 Worm   386 TRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVT 450

  Fly   657 NLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIV 721
            |||||||:||||||||||.|||||:|::::|:|||:|||:|||||||.||||||::|.||:|::|
 Worm   451 NLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILV 515

  Fly   722 GGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMS 786
            ||:||||.::.|:.||..:..||.|||||||:|.|.||.||||||||.||.::..||:..|..::
 Worm   516 GGKSVVCSDITQNAVICAEHQKFLKLLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVA 580

  Fly   787 -LHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGR 850
             |||||||.||||:|.|||:|.:::|:||||||||||||:||||||||.||||||||||.|||||
 Worm   581 PLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGR 645

  Fly   851 AGKKGSAYTFITPE-QSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGG-GFSG 913
            ||:||.||||:.|| |.:.||:|.||.:.:|...||:|:|::..:|:...||||.|..|| ||.|
 Worm   646 AGRKGYAYTFVLPEHQEKMAGEICRAFETAGCKPPADLKAMFERFKSEMAAEGKEVKLGGKGFEG 710

  Fly   914 KGFKFDEQEFNAAKESKKLQKAALGLADSDDEEDIEQDIDQQIEQIFAAKRTV---KDTSAAATA 975
            .|:|:||.|..|....|::.:...|:....|::|   |:::|:..:...||.|   |..|...::
 Worm   711 SGYKYDEGEAEADANKKRMTRLVHGMEAGGDDDD---DLEEQLSSMIKTKRRVVHGKPQSEKPSS 772

  Fly   976 AAAAAAAAAAAAAAVSGANPALASAAAQAAAAAAAANIAIAAASAPAAAGGAPSVAMGGALSSDK 1040
            ::..|            .|...|...|..|...|.                              
 Worm   773 SSGNA------------KNDREAGKRADQAKLKAE------------------------------ 795

  Fly  1041 LELAKRLASKINSSKNLDTKGSVVTVEPMIKGPHVTGAAATLLTARTVAEQMAAKLNNKLNYQPK 1105
             ||:.||.......:.::...:.:|.|.:::|..|   |...::|..:|::.|.:||.||||   
 Worm   796 -ELSTRLKGASQVVQPVEKTAAQLTAEAVLRGAEV---APAQMSAAMLAKEKANRLNEKLNY--- 853

  Fly  1106 EDEEGLGPLVGGTTNP-------FTKYEEELEINDFPQQARWKVTSKEALAQISEYSEAGLTVRG 1163
                     :||...|       :..:|||.:|||||||.|:|:.|:|::..::|.:|.|::|||
 Worm   854 ---------LGGEAAPTQQQEEAWEYFEEEWDINDFPQQVRYKICSRESVGHVAELAEVGISVRG 909

  Fly  1164 TYVPQGKNPPDGERKLYLAIESCSELAVQKAKREITRLIKEELLKLSSAHHVFNKG----RYKV 1223
            .:||.||.|.:|||:|:|.:|:.||..::.||.||.|::||...:|::.   ..:|    ||||
 Worm   910 VHVPPGKEPKNGERRLHLLLEARSERNLKAAKEEIIRIMKEAFRQLTAQ---LQRGGTQARYKV 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6227NP_573020.2 SrmB 482..967 CDD:223587 308/490 (63%)
DEADc 516..719 CDD:238167 149/202 (74%)
HELICc 733..860 CDD:238034 87/127 (69%)
ddx-46NP_001033411.1 SrmB 276..793 CDD:223587 315/531 (59%)
DEADc 316..514 CDD:238167 147/197 (75%)
HELICc 534..655 CDD:238034 84/120 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166434
Domainoid 1 1.000 284 1.000 Domainoid score I861
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5430
Inparanoid 1 1.050 765 1.000 Inparanoid score I275
Isobase 1 0.950 - 0 Normalized mean entropy S1040
OMA 1 1.010 - - QHG54542
OrthoDB 1 1.010 - - D146665at33208
OrthoFinder 1 1.000 - - FOG0004627
OrthoInspector 1 1.000 - - oto18403
orthoMCL 1 0.900 - - OOG6_102375
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R985
SonicParanoid 1 1.000 - - X2240
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

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