DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and DDX53

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:NP_874358.2 Gene:DDX53 / 168400 HGNCID:20083 Length:631 Species:Homo sapiens


Alignment Length:551 Identity:190/551 - (34%)
Similarity:294/551 - (53%) Gaps:54/551 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 MQEVNNEMR-RVNNFVNPPAKSQGVVILTGVAKKKT---TTLKKGEVIEQNMDSLEYSSEDELE- 439
            :|.:|.|.. :|..|.|...|          ||.|.   |.::|.|         .|:||..:: 
Human    82 IQIINGESEAKVRIFGNREMK----------AKAKAAIETLIRKQE---------SYNSESSVDN 127

  Fly   440 --------------DIRDTAVNLAMKHRKELAKIDHSSVTYA---PFRKNFYVEVPELTRMTAAD 487
                          ||...|..|:...|...|.::.....:|   |.:||||:|....:.|:...
Human   128 AASQTPIGRNLGRNDIVGEAEPLSNWDRIRAAVVECEKRKWADLPPVKKNFYIESKATSCMSEMQ 192

  Fly   488 VEKYRSDLEGIQV------KGKGCPKPIKTWAQCGVSKKE-MEVLRRLGFEKPTPIQCQAIPAIM 545
            |..:|.:...|..      :.:..|||...:........: ::.:.|:|..||||||.||.|.|:
Human   193 VINWRKENFNITCDDLKSGEKRLIPKPTCRFKDAFQQYPDLLKSIIRVGIVKPTPIQSQAWPIIL 257

  Fly   546 SGRDLIGIAKTGSGKTLAFILPMFRHILDQP-SMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKS 609
            .|.|||.:|:||:||||::::|.|.|:..|| |.|..:|...:::.|||||.:.:..:..|:|..
Human   258 QGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKYSYK 322

  Fly   610 LGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD 674
             ||:.:|:|||...:.||.::.:|.:||:.||||:.|:...||   .|||.:||:|:||||:|.|
Human   323 -GLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQMNNS---VNLRSITYLVIDEADKMLD 383

  Fly   675 MGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVC-KEVEQHVVIL 738
            |.||||:.:|:.:|||||||||.|||:|..:..||...||.|:.|.||..::|. ..|:|::::.
Human   384 MEFEPQIRKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVT 448

  Fly   739 NDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDF 803
            .:..|.....|.:........:|:||.::..||.|..|.........||||..:|.|::..:.||
Human   449 TEKEKRALTQEFVENMSPNDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDF 513

  Fly   804 KSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRY 868
            |||.:::||.|.:.:||||:.|:..|.|||.|.:.:.||||.|..||.||.|::.|.||...|:.
Human   514 KSGNIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKM 578

  Fly   869 AGDIIRAMDLSGTLIPAELQALWTEYKALQE 899
            ||::|:.:|.:...:|.:|..:..:||..|:
Human   579 AGELIKILDRANQSVPEDLVVMAEQYKLNQQ 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653 1/2 (50%)
DEAD-like_helicase_N 454..899 CDD:475120 168/456 (37%)
KH-I_DDX46 1121..1223 CDD:411901
DDX53NP_874358.2 KH-I_DDX43_DDX53 50..115 CDD:411858 11/42 (26%)
Q motif 222..250 7/27 (26%)
SrmB 231..625 CDD:440279 154/383 (40%)
DEAD box 376..379 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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