DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp5 and Ddx4

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:XP_011242920.1 Gene:Ddx4 / 13206 MGIID:102670 Length:738 Species:Mus musculus


Alignment Length:558 Identity:179/558 - (32%)
Similarity:284/558 - (50%) Gaps:73/558 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 PAKSQGVVILTGVAKKKTTTLKKGEVIEQNMDSLEYSSEDELEDIRDTAVNLAMKHRKELAKIDH 461
            ||.|..|..|||          .|:..:....|.....:...|::...:...:.|...|..:...
Mouse   193 PAASDSVQCLTG----------NGDTYQSRSGSGRGGYKGLNEEVVTGSGKNSWKSETEGGESSD 247

  Fly   462 S---SVTYAPFRKNFYVEVPE------LTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGV 517
            |   .|||.|      ...||      ....|..:.:||.:.|  ::|.|...|..|.|:.:..:
Mouse   248 SQGPKVTYIP------PPPPEDEDSIFAHYQTGINFDKYDTIL--VEVSGHDAPPAILTFEEANL 304

  Fly   518 SKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGD 582
            .:.....:.:.|:.|.||:|..:||.:::||||:..|:||||||.||:||:..|:     |.||.
Mouse   305 CQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHM-----MRDGI 364

  Fly   583 GAI---------AIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIV 638
            .|.         .||:||||||..||..:.||||....:|.|.:||||.....:.::.:|..|:.
Mouse   365 TASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILC 429

  Fly   639 CTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIID----NVRPDRQTVMFSA 699
            .||||::|::....   ..|::|.|:||||||||.||||.|::.::|.    ..:..|||::|||
Mouse   430 ATPGRLMDIIGKEK---IGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSA 491

  Fly   700 TFPRQMEALARRILKKP-IEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELL-GIYQEAGSIIV 762
            |||.:::.||...||.. :.|.||.....|::|:|.::.:...:|..||:|:| .|..|  ..:|
Mouse   492 TFPEEIQRLAGDFLKSSYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRNIGDE--RTMV 554

  Fly   763 FVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLI 827
            ||:.::.||.:...|.:......|:||..:|.:|:..:.||:.||..:|:||||||||||::::.
Mouse   555 FVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQ 619

  Fly   828 LVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFI-TPEQSRYAGDIIRAMDLSGTLIPAELQ--- 888
            .|:|:|:|:..::||||.|||||.|..|.|.:|. |...:..|..:::.:..:...:||.|:   
Mouse   620 HVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTDSDNHLAQPLVKVLSDAQQDVPAWLEEIA 684

  Fly   889 ----------------ALWTEYKALQEAEGK-TVHTGG 909
                            |::......:..:|| |::|.|
Mouse   685 FSTYVPPSFSSSTRGGAVFASVDTRKNYQGKHTLNTAG 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653
DEAD-like_helicase_N 454..899 CDD:475120 163/488 (33%)
KH-I_DDX46 1121..1223 CDD:411901
Ddx4XP_011242920.1 DEADc_DDX4 266..518 CDD:350810 96/261 (37%)
SF2_C_DEAD 524..653 CDD:350174 51/130 (39%)
Blue background indicates that the domain is not in the aligned region.

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