DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prp5 and abs

DIOPT Version :10

Sequence 1:NP_573020.2 Gene:Prp5 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster
Sequence 2:XP_318117.5 Gene:abs / 1278516 VectorBaseID:AGAMI1_003670 Length:648 Species:Anopheles gambiae


Alignment Length:627 Identity:202/627 - (32%)
Similarity:313/627 - (49%) Gaps:64/627 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 SEPEVEDKPQPEAEPEDEIDPLDAYMQEVNNEMRRVNNFVNPPAKSQGVVILTGVAKKKTTTLKK 419
            |.|.|:...:...:.|||.|  ::::..|:.:.|:....:    |...:|.||..|   :|..|.
Mosquito    37 SSPRVKRYRRDSQKSEDEED--NSFVPYVSVKERKKQQLL----KLGRIVQLTAEA---STVGKS 92

  Fly   420 GEVIEQNMDSLEYS-----------SEDELEDIRDT-AVNLAMKHRKELAKIDHS------SVTY 466
            ....|...:|.|.|           ...||:.|.:. .::...|..||..||..|      .:..
Mosquito    93 SSENEHEEESTEESWGRKFNISLLDQHTELKKIAEAKKISAVEKQLKEEEKILESVAEKKALMGV 157

  Fly   467 APFRKNFYVEVPELTRMT---------AADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEM 522
            |...|....|.|..|..|         .:..||.|..|. |..:|:..|.|::|:.:..:.|..:
Mosquito   158 AELAKGIQYEDPIKTSWTPPRYILSKPESRHEKIREKLR-ILTEGENVPPPLRTFREMKLPKAVL 221

  Fly   523 EVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQ----PSMEDGDG 583
            ..|.:...:||:|||.|.|||:::||||||||.|||||||.|:||:....|:|    |.:: .:|
Mosquito   222 AALAKRNIKKPSPIQVQGIPAVLAGRDLIGIAFTGSGKTLVFVLPIIMFCLEQELRLPFIK-REG 285

  Fly   584 AIAIIMAPTRELCMQIGKDIRKFSKSL------GLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 642
            ...:|:.|:|||..|....|:.:.:.|      .:|.|...||..:::.||.:::||.|:|.|||
Mosquito   286 PYGLIICPSRELAKQTHDIIQYYCRHLQEAGMPEIRTVLAIGGVPVNDAIAIIQQGAHIMVATPG 350

  Fly   643 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEA 707
            |::|||   ..::..|....|:.:||||||.|||||..|..|....:..|||::||||.|::::.
Mosquito   351 RLMDML---DKKLVTLDVCRYLCMDEADRMIDMGFEEDVRTIFSYFKGQRQTLLFSATMPKKIQN 412

  Fly   708 LARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADI 772
            .|:..|.||:.:.||........|.|.|..:..:||...|||.|  .:....:::|.:|:::.|.
Mosquito   413 FAKSALVKPVTINVGRAGAASMNVTQDVEYVKQEAKVVYLLECL--QKTPPPVLIFAEKKQDVDA 475

  Fly   773 LLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNH 837
            :...|:......:::|||.||.:|..::..|::.:..:|:||.||::|||..|:..|:|||:|:.
Mosquito   476 IHEYLLLKGVEAVAIHGGKDQEERYRSVESFRNQEKDVLVATDVASKGLDFPDVQHVINYDMPDD 540

  Fly   838 YEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEG 902
            .|:||||.|||||:|.||.|.|||.....::.     .:||...||.|:.:......:...|.| 
Mosquito   541 IENYVHRIGRTGRSGSKGLATTFINKATEQFV-----LLDLKHLLIEAQQKVPPFLGELCSETE- 599

  Fly   903 KTVHTGGGFS---GKGFKFDEQEFNAAKESKKLQKAALGLAD 941
            |....|.|.|   |.|.:..|.....|.:||  |.:.:|..|
Mosquito   600 KYADLGDGCSYCGGLGHRITECPKLEAVQSK--QASNIGRRD 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp5NP_573020.2 Trypan_PARP <291..383 CDD:368653 7/27 (26%)
DEAD-like_helicase_N 454..899 CDD:475120 163/469 (35%)
KH-I_DDX46 1121..1223 CDD:411901
absXP_318117.5 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.