DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12608 and AT1G65030

DIOPT Version :9

Sequence 1:NP_573019.1 Gene:CG12608 / 32463 FlyBaseID:FBgn0030630 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_176683.1 Gene:AT1G65030 / 842811 AraportID:AT1G65030 Length:345 Species:Arabidopsis thaliana


Alignment Length:365 Identity:103/365 - (28%)
Similarity:168/365 - (46%) Gaps:61/365 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MEIIVGTYEEVLLGFKLIKSPTDGLTDSVKFELKQTFADSSHAGSITSVAVQWPWVASGGTDDRI 69
            |.||.|:||..:.||||  .||....:|....|...|:..||...||:||...|..||||:||.|
plant     1 MSIIAGSYERFIWGFKL--KPTKHDAESQTLTLSPLFSYPSHISPITTVACSGPAAASGGSDDTI 63

  Fly    70 FVYDMRTRKQSQIIL--SHAGRVNTLKF-TP-DLS---HLLSGSDDGHMIATRVGSWTKEGDWQK 127
            .:||:.:......:|  :||..:..|.| || .||   :|:|.:.||.:.......:.....: :
plant    64 HLYDLPSASSLGSLLDHNHAASITALSFYTPSSLSFPRNLISAAADGSVAIFDTDPFVLLKSF-R 127

  Fly   128 AHAGQAVTHISCHPSSKLALSLGGDQVLNTWNLVNGRVAYKTNLKNKATLGLQPGCLSWSKQGDH 192
            .|. :||..::.|||.||||::..|:.....|||.|:.::...|.::|:|      :.:...|:.
plant   128 PHK-KAVNDLAIHPSGKLALAVYRDEFFAMLNLVRGKRSFCCRLGHEASL------VKFDPSGER 185

  Fly   193 FTLSGPLVLEIWGIENAHVMRRIEMPAKP--ICITWLDGNECLTG----------LDNGNIAWIS 245
            |.:.....:.:...|:|.::..:|.|::.  :|.|..:.....||          .::|.:|: |
plant   186 FYMVVSNKVGVHQSEDAKLLLELENPSRKRILCATPGESGTLFTGGEDRAITAWDTNSGKLAY-S 249

  Fly   246 LKDEDDTPPTFILAHEARVKAIAYLNE-----------LLATVSSAGEIKVWKIDMETRK-LEEI 298
            ::|          ||.||:|.|..|..           |:.:.||.|.|:||.:.|..:: .:.:
plant   250 IED----------AHPARIKGIVVLTRNDSDGSLEDPYLIGSASSDGIIRVWDVRMAAKENTKPL 304

  Fly   299 ASSFMDCRPTDL---GLLDLR--QFGNVQPVEQRIKVEEK 333
            |.:....|.|.|   .|..:|  |.|..:|.    ||:|:
plant   305 AETNTKSRLTCLAGSALKSMRRPQIGKQEPQ----KVDEE 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12608NP_573019.1 WD40 33..>289 CDD:225201 77/285 (27%)
WD40 45..295 CDD:295369 76/280 (27%)
WD40 repeat 51..85 CDD:293791 14/35 (40%)
WD40 repeat 90..128 CDD:293791 10/42 (24%)
WD40 repeat 135..170 CDD:293791 12/34 (35%)
WD40 repeat 181..214 CDD:293791 4/32 (13%)
WD40 repeat 264..286 CDD:293791 8/32 (25%)
AT1G65030NP_176683.1 WD40 39..319 CDD:421866 80/298 (27%)
WD40 repeat 45..81 CDD:293791 14/35 (40%)
WD40 repeat 86..127 CDD:293791 10/41 (24%)
WD40 repeat 134..167 CDD:293791 12/32 (38%)
WD40 repeat 174..209 CDD:293791 6/40 (15%)
WD40 repeat 216..255 CDD:293791 9/49 (18%)
WD40 repeat 262..291 CDD:293791 6/28 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 44 1.000 Domainoid score I4700
eggNOG 1 0.900 - - E1_KOG0294
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H39574
Inparanoid 1 1.050 97 1.000 Inparanoid score I2208
OMA 1 1.010 - - QHG59992
OrthoDB 1 1.010 - - D824688at2759
OrthoFinder 1 1.000 - - FOG0005831
OrthoInspector 1 1.000 - - otm3456
orthoMCL 1 0.900 - - OOG6_103104
Panther 1 1.100 - - LDO PTHR44675
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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