DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12608 and Pak1ip1

DIOPT Version :9

Sequence 1:NP_573019.1 Gene:CG12608 / 32463 FlyBaseID:FBgn0030630 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_080826.2 Gene:Pak1ip1 / 68083 MGIID:1915333 Length:382 Species:Mus musculus


Alignment Length:484 Identity:131/484 - (27%)
Similarity:193/484 - (39%) Gaps:148/484 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MEIIVGTYEEVLLGFKLIKSPTDGLTDSVKFELKQT------FADSSHAGSITSVAVQWPWVASG 63
            ||::.|:||:||.||.:.:.|       .|...::|      |...||..|::.:|....:|.||
Mouse     1 MELVAGSYEQVLFGFTVQRGP-------AKSGHQETWTPVADFTHHSHTASLSVLASNSRYVVSG 58

  Fly    64 GTDDRIFVYDMRTRKQSQIILSHAGRVNTLKFTPDLSHLLSGSDDGHMIATRVGSWTKEGDWQKA 128
            ..|:.|.:|||:.:.:...::.|||.|..|||..: .||:||::|||:....|..| |.....||
Mouse    59 SKDETIHIYDMKRKVEHGALVHHAGTVTCLKFHGN-QHLISGAEDGHICIWDVKRW-KCLKTFKA 121

  Fly   129 HAGQAVTHISCHPSSKLALSLGGDQVLNTWNLVNGRVAYKTNLKNKATLGLQPGCLSWSKQGDHF 193
            |.|. ||.:|.|||.|||||:|.|:.|.||||:.||.|:..|:|..|.:      :.||..|..:
Mouse   122 HRGH-VTFLSIHPSGKLALSVGTDKTLRTWNLIEGRSAFIKNIKENAHI------VEWSPSGGKY 179

  Fly   194 TLSGPLVLEIWGIENAHVMRRIEMPAKPICITWL-------------------DGNECLTGLDNG 239
            .:.....::::.:..|.|...|....:...:|:|                   |..|||..    
Mouse   180 IVVVQNKVDVYRLGTASVSGTITNGKRISSVTFLSDSVLAVAGDEEVVRIFDCDSLECLCE---- 240

  Fly   240 NIAWISLKDEDDTPPTFILAHEARVKAIAYL----NELLATVSSAGEIKVWKIDMETRKLEEIAS 300
                             ..|||.|||.:...    :.:|.|.|:.|.||:|.:            
Mouse   241 -----------------FRAHENRVKDMVSFEVPDHHVLVTASNDGFIKMWTL------------ 276

  Fly   301 SFMDCRPTDLGLLDLRQFGNVQPVEQRIKVEEKPKAK-----VESDQSAK------PAAPRGFVT 354
                  |.|            :.|...:..|.|..|:     |..|::|.      |||      
Mouse   277 ------PQD------------KKVPPSLLCEAKTGARLTCLTVWLDRAANGMASLPPAA------ 317

  Fly   355 IEYEQDKNLDAEKKKGKGKKNKIQAKKAQQKAEESSEESNSSEEKESDDFSDSDSDVSSDHGHRK 419
             |...|:....||:.|             ...:|.:.|.||.:           ||||.|    .
Mouse   318 -EPCPDQPKTIEKESG-------------DTVQEETSEPNSEK-----------SDVSGD----S 353

  Fly   420 RKPMKRKQQPTPASKGK-----AKQQKKK 443
            ::|.| ...|..|.|.|     .|::|||
Mouse   354 KQPTK-GNSPVTAKKRKMATMSEKKRKKK 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12608NP_573019.1 WD40 33..>289 CDD:225201 85/284 (30%)
WD40 45..295 CDD:295369 82/272 (30%)
WD40 repeat 51..85 CDD:293791 9/33 (27%)
WD40 repeat 90..128 CDD:293791 14/37 (38%)
WD40 repeat 135..170 CDD:293791 20/34 (59%)
WD40 repeat 181..214 CDD:293791 5/32 (16%)
WD40 repeat 264..286 CDD:293791 8/25 (32%)
Pak1ip1NP_080826.2 WD40 3..>282 CDD:225201 95/345 (28%)
WD40 28..274 CDD:295369 83/275 (30%)
WD 1 37..77 12/39 (31%)
WD 2 80..120 17/41 (41%)
WD40 repeat 86..121 CDD:293791 13/36 (36%)
WD 3 122..160 23/38 (61%)
WD40 repeat 126..162 CDD:293791 21/35 (60%)
WD40 repeat 170..202 CDD:293791 5/31 (16%)
WD 4 202..240 6/37 (16%)
WD40 repeat 207..242 CDD:293791 6/55 (11%)
WD 5 243..284 16/70 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..382 27/105 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850030
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0294
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H39574
Inparanoid 1 1.050 131 1.000 Inparanoid score I4608
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59992
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005831
OrthoInspector 1 1.000 - - otm42582
orthoMCL 1 0.900 - - OOG6_103104
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1339
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.690

Return to query results.
Submit another query.