DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12608 and CG3436

DIOPT Version :10

Sequence 1:NP_573019.1 Gene:CG12608 / 32463 FlyBaseID:FBgn0030630 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_608501.1 Gene:CG3436 / 33180 FlyBaseID:FBgn0031229 Length:347 Species:Drosophila melanogaster


Alignment Length:262 Identity:51/262 - (19%)
Similarity:89/262 - (33%) Gaps:81/262 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 HAGSITSVAV--QWPWVASGGTDDRIFVYDMRTRKQSQIILS-HAGRVNTLKFTPDLSHLLSGSD 107
            |.|.|.:...  :...:.|.|.|.:|:::.:....::.:.:| |:|.|....||||.||:.:.|.
  Fly    54 HEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCST 118

  Fly   108 DGHM----IATRVGSWTKEGDWQKAHAGQAVTHISCHPSSKLALSLGGDQVLNTWNLVNGRVAYK 168
            |..:    |||        |..|:...|..                         |.||.     
  Fly   119 DKTLAFWDIAT--------GQRQRRFKGHG-------------------------NFVNS----- 145

  Fly   169 TNLKNKATLGLQPGCLSWSKQGDHFTLSG--PLVLEIWGIENAHVMRRIEMPAKPICITWLD-GN 230
                           :..|::|.....||  ...::||.....|....:|.|.:...:.:.| |.
  Fly   146 ---------------VQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGE 195

  Fly   231 ECLT-GLDNGNIAW--------ISLKDEDDTPPTFILAHEARVKAIAYLNELLATVSSAGEIKVW 286
            :.:: |:||....|        ..|:...||.....|:.|         .:.:.|.:....::||
  Fly   196 QVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPE---------GDFILTNAMDNTLRVW 251

  Fly   287 KI 288
            .:
  Fly   252 DV 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12608NP_573019.1 WD40 <36..289 CDD:441893 51/262 (19%)
WD40 repeat 51..85 CDD:293791 4/35 (11%)
WD40 repeat 90..128 CDD:293791 14/41 (34%)
WD40 repeat 135..170 CDD:293791 3/34 (9%)
WD40 repeat 181..214 CDD:293791 7/34 (21%)
WD40 repeat 264..286 CDD:293791 1/21 (5%)
CG3436NP_608501.1 WD40 <46..342 CDD:441893 51/262 (19%)
WD40 repeat 58..96 CDD:293791 5/37 (14%)
WD40 repeat 102..138 CDD:293791 13/43 (30%)
WD40 repeat 143..180 CDD:293791 9/56 (16%)
WD40 repeat 186..221 CDD:293791 6/34 (18%)
WD40 repeat 227..267 CDD:293791 5/36 (14%)
WD40 repeat 277..313 CDD:293791
WD40 repeat 319..342 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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