Protein Alignment CG12608 and skb15

DIOPT Version :10

• Sequence 1: NP_573019.1
• Gene: CG12608 / 32463
• FlyBaseID: FBgn0030630
• Length: 443
• Species: Drosophila melanogaster
• Sequence 2: NP_587918.1
• Gene: skb15 / 2538757
• PomBaseID: SPCC16C4.08C
• Length: 341
• Species: Schizosaccharomyces pombe
• Alignment Length: 441
• Identity: 97/441 - (21%)
• Similarity: 177/441 - (40%)
• Gaps: 125/441 - (28%)

  Fly     5 MEIIVGTYEEVLLGFKLIKSPTDGLTDSVKFELKQTFADSSHAGSITSVAVQWPWVASGGTDDRI 69
            :..:||||..::.|..         .|..:.:.|..:...:|.|::|::||...::||..:|:.|
pombe     2 LRFVVGTYTHLIYGVD---------ADIERKKCKPLWLFEAHEGALTALAVDGIYLASTSSDETI 57

  Fly    70 FVYDMRTRKQSQII-----LSHAGRVNTLKFTPDLSHLLSGSDDGHMIATRVGSWTKEGDWQKAH 129
            .::|.....|...:     :::| .:..:.||.  :|||:..|:|     ::..|:| |.|...|
pombe    58 KIFDHTRNVQIADVSVPTDIANA-CIRDMCFTK--NHLLACHDNG-----QISMWSK-GSWLLVH 113

  Fly   130 -----AGQAVTHISCHPSSKLALSLGGDQVLNTWNLV---NGRVAYKTNLKNKATLGLQPGCLSW 186
                 :.:.:|.|:.|||.||||::|||..|..|:||   .|:|...:.:........:...:..
pombe   114 TLKSSSHKGITGIAVHPSEKLALTVGGDGKLRLWDLVRGKGGKVLPLSTIPESILFLNESSFVIM 178

  Fly   187 SKQG-DHFTLSGPLVLEIWGIENAHVMRRIEMPAKPICITWLDGNECLTGLDNGNIAWISLKDED 250
            |::| |.|.|.   :..::...:       :.....:|   |..::.:.|.|||.:..:
pombe   179 SRRGIDAFKLD---LTSLFSFSS-------KSQLNALC---LYQSKLIVGRDNGTVLVL------ 224

  Fly   251 DTPPTFIL----AHEARVKAIAYLNELLATVSSAGEIKVWKIDMETRKLEEIASSFMDCRPTDLG 311
            ||....||    ||:.|||::..:::.|.|.||.|.:.:|..|...
pombe   225 DTSDGKILHEFTAHKKRVKSVYPVDDYLITASSDGSVCIWDKDWNL------------------- 270

  Fly   312 LLDLRQFGNVQPVEQRIKVEEKPKAKVE--SDQSAKPAAPRGFVTIEYEQDKNLDAEKKKGKGKK 374
                       .:|..|....:....|.  :|.:::|              ||::.|..|
pombe   271 -----------VIEHNIPEGNRITCMVAMLADSNSEP--------------KNVEDEAAK----- 305

  Fly   375 NKIQAKKAQQKAEESSEESNSSEEKESDDFSDSDSDVSSDHGHRKRKPMKR 425
                    :|..:..:.|::|..|.||:.:|.|           |:.|:||
pombe   306 --------RQSLDSETSETSSESESESEYYSTS-----------KQPPVKR 337

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12608	NP_573019.1	WD40	<36..289	CDD:441893	69/270 (26%)
		WD40 repeat	51..85	CDD:293791	9/38 (24%)
		WD40 repeat	90..128	CDD:293791	11/37 (30%)
		WD40 repeat	135..170	CDD:293791	18/37 (49%)
		WD40 repeat	181..214	CDD:293791	5/33 (15%)
		WD40 repeat	264..286	CDD:293791	7/21 (33%)
skb15	NP_587918.1	WD40	<26..265	CDD:441893	68/266 (26%)
		WD40 repeat	37..79	CDD:293791	9/41 (22%)
		WD40 repeat	82..116	CDD:293791	12/41 (29%)
		WD40 repeat	124..195	CDD:293791	23/73 (32%)
		WD40 repeat	202..236	CDD:293791	10/42 (24%)
		WD40 repeat	242..275	CDD:293791	10/62 (16%)