DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9123 and AT1G65030

DIOPT Version :9

Sequence 1:NP_573018.1 Gene:CG9123 / 32462 FlyBaseID:FBgn0030629 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_176683.1 Gene:AT1G65030 / 842811 AraportID:AT1G65030 Length:345 Species:Arabidopsis thaliana


Alignment Length:368 Identity:96/368 - (26%)
Similarity:155/368 - (42%) Gaps:67/368 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MEIIEATNEELLLGFKLIKSPTDGFTDSVKFELKQTFADSSYARSITSLAVQWPWVASGGTDGRI 69
            |.||..:.|..:.||||  .||....:|....|...|:..|:...||::|...|..||||:|..|
plant     1 MSIIAGSYERFIWGFKL--KPTKHDAESQTLTLSPLFSYPSHISPITTVACSGPAAASGGSDDTI 63

  Fly    70 FVYDMRTRKQSQIIL--SHAGRVNTLKFTPDLSL-----LLSGSDDGHMIATRVGSWT--KEYDW 125
            .:||:.:......:|  :||..:..|.|....||     |:|.:.||.:.......:.  |.:..
plant    64 HLYDLPSASSLGSLLDHNHAASITALSFYTPSSLSFPRNLISAAADGSVAIFDTDPFVLLKSFRP 128

  Fly   126 QKAHAGQAVTHVSCHPSSKLALSLGGDQVLNTWNLVNGCVAHKTNLKNKATLDFQTGCLSWSKQG 190
            .|    :||..::.|||.||||::..|:.....|||.|..:....|.::|:|      :.:...|
plant   129 HK----KAVNDLAIHPSGKLALAVYRDEFFAMLNLVRGKRSFCCRLGHEASL------VKFDPSG 183

  Fly   191 DHFTLSGPLVLEIWGIENAHVMRRIEMPSKP--ICITWLDGNECLTG----------LDNGNIAW 243
            :.|.:.....:.:...|:|.::..:|.||:.  :|.|..:.....||          .::|.:|:
plant   184 ERFYMVVSNKVGVHQSEDAKLLLELENPSRKRILCATPGESGTLFTGGEDRAITAWDTNSGKLAY 248

  Fly   244 ISLKDEDDTPPTFILAHEVRVKAIAYLNE-----------FLATVSIAGQIKVWKIDM----ETR 293
             |::|          ||..|:|.|..|..           .:.:.|..|.|:||.:.|    .|:
plant   249 -SIED----------AHPARIKGIVVLTRNDSDGSLEDPYLIGSASSDGIIRVWDVRMAAKENTK 302

  Fly   294 KLEEI-ARSFMDCRPTDLGLLDLR--QFGNVRPVEQRTKVEEK 333
            .|.|. .:|.:.|. ....|..:|  |.|...|    .||:|:
plant   303 PLAETNTKSRLTCL-AGSALKSMRRPQIGKQEP----QKVDEE 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9123NP_573018.1 WD40 49..295 CDD:295369 70/281 (25%)
WD40 repeat 50..85 CDD:293791 13/36 (36%)
WD40 <60..294 CDD:225201 66/269 (25%)
WD40 repeat 91..129 CDD:293791 10/44 (23%)
WD40 repeat 134..170 CDD:293791 13/35 (37%)
WD40 repeat 178..216 CDD:293791 4/37 (11%)
WD40 repeat 222..257 CDD:293791 8/44 (18%)
WD40 repeat 264..288 CDD:293791 8/34 (24%)
AT1G65030NP_176683.1 WD40 39..319 CDD:421866 75/301 (25%)
WD40 repeat 45..81 CDD:293791 12/35 (34%)
WD40 repeat 86..127 CDD:293791 9/40 (23%)
WD40 repeat 134..167 CDD:293791 12/32 (38%)
WD40 repeat 174..209 CDD:293791 6/40 (15%)
WD40 repeat 216..255 CDD:293791 9/49 (18%)
WD40 repeat 262..291 CDD:293791 4/28 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 44 1.000 Domainoid score I4700
eggNOG 1 0.900 - - E1_KOG0294
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H39574
Inparanoid 1 1.050 97 1.000 Inparanoid score I2208
OMA 1 1.010 - - QHG59992
OrthoDB 1 1.010 - - D824688at2759
OrthoFinder 1 1.000 - - FOG0005831
OrthoInspector 1 1.000 - - otm3456
orthoMCL 1 0.900 - - OOG6_103104
Panther 1 1.100 - - O PTHR44675
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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