DRSC/TRiP Functional Genomics Resources

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Protein Alignment HDAC6 and HOS1

DIOPT Version :10

Sequence 1:NP_001259569.1 Gene:HDAC6 / 32461 FlyBaseID:FBgn0026428 Length:1179 Species:Drosophila melanogaster
Sequence 2:NP_015393.1 Gene:HOS1 / 856181 SGDID:S000006272 Length:470 Species:Saccharomyces cerevisiae


Alignment Length:315 Identity:76/315 - (24%)
Similarity:134/315 - (42%) Gaps:49/315 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   550 DTGHPEQPSRIQHIHKMHD------DYGLLKQMKQLSPR------------AATTDEVCLAHTRA 596
            |..:|...|:...:.::.|      ||...:.:::.:.|            |...:..|:.::..
Yeast    81 DVNNPMVESKWSELSELADNWNEKIDYNPSQDLQRFTTRENLYNYYLNHSQALENNMDCINNSEV 145

  Fly   597 HVN---TVRRLLGREPKE--LHDAAGIYNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGIC 656
            ..|   |...:|..|.|:  |.....|::.:.::     |..: .|..|..:|.:...|...|| 
Yeast   146 PTNDKPTDTYILNSETKQYNLEGDCPIFSYLPMY-----CQVI-TGATLNLLDHLSPTERLIGI- 203

  Fly   657 NVRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYI 721
            |.....|||.:....|||..|:|.:..| .:|...|.::..||:|:|||:|.:..|:.:.::..|
Yeast   204 NWDGGRHHAFKQRASGFCYINDVVLLIQ-RLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTI 267

  Fly   722 SLHRYEHGSFFPKGPDGNFDVVGKG----AGRGFN-VNIPWNKKGMGDLEYALAFQQLIMPIAYE 781
            |:|.||.| |||          |.|    :.:..| ||||. |.|..|....|...:::.|:...
Yeast   268 SVHLYEPG-FFP----------GTGSLSDSRKDKNVVNIPL-KHGCDDNYLELIASKIVNPLIER 320

  Fly   782 FNPQLVLVSAGFDAAIGDPLGGCKVTAEGYG-MLTHWLSALASGRIIVCLEGGYN 835
            ..|:.:::..|.|..:||.....::|..|.. ::.:.:.:.....|.:...||||
Yeast   321 HEPEALIIECGGDGLLGDRFNEWQLTIRGLSRIIINIMKSYPRAHIFLLGGGGYN 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC6NP_001259569.1 HDAC10_HDAC6-dom1 119..457 CDD:212526
HDAC6-dom2 538..895 CDD:212527 76/315 (24%)
zf-UBP 1007..1069 CDD:460464
HOS1NP_015393.1 HDAC_Hos1 5..390 CDD:212543 76/315 (24%)
Blue background indicates that the domain is not in the aligned region.

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