Sequence 1: | NP_001259569.1 | Gene: | HDAC6 / 32461 | FlyBaseID: | FBgn0026428 | Length: | 1179 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008764065.1 | Gene: | Hdac7 / 84582 | RGDID: | 619982 | Length: | 975 | Species: | Rattus norvegicus |
Alignment Length: | 1099 | Identity: | 280/1099 - (25%) |
---|---|---|---|
Similarity: | 415/1099 - (37%) | Gaps: | 323/1099 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSPPIVTRRSAQQAKIQTRAMASKSKTGTTGAATAAG---------------------------- 37
Fly 38 -------GTGSSSGSISGGFNAADP------------RKS-NKPNAAL----LEAKRRARNNMLK 78
Fly 79 NQGCGSQESVTDIFQNAVNSKSLVRKPTALIYDESMSQHCCLWDKEHYECPERFTRVLERCRELN 143
Fly 144 LTERCLELPSRSATKDEIL--RLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELSL 206
Fly 207 LASGSTIELVDHLVAGKAQNGMAIIRPPG------------HHAMKAEYNGYCFFNNVALATQHA 259
Fly 260 LDVHKLQRILIIDYDVHH-------GQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIG 317
Fly 318 SGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVAL---EFQPELIIVSAGYDAALGCPEGEMEV 379
Fly 380 TPACYPHLLNPLLRLADARVAVVLEGGYCLDSLAEGAALTLRSLLGDPCPPLVETVPLPRAELAQ 444
Fly 445 ALLSCIAVHRPHWR-------CLQLQQTYDCVELQDRDKEEDLHTVLRHWIGGPPPMDRYP---- 498
Fly 499 -----TRDTAIPLPPEKLTS--NAARLQVLRAETKLSVPSFKVCYAYDAQMLLH-CNLNDTG-HP 554
Fly 555 EQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHV-----NTVRR----------L 604
Fly 605 LGREPKELHDAAGI---YNSVYLHPRTFDCATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHAE 666
Fly 667 QDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSF 731
Fly 732 FPKGPDGNFDVVGKGAGRGFNVNIPWN---KKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGF 793
Fly 794 DAAIGD--PLGGCKVTAEGYGMLTHWLSALASGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVP 856
Fly 857 TPQLGATALQKPPTVAFQSCVESLQQCLQVQRNHWRSLEFVGR----RLPRDPVVGENNNEDFLT 917
Fly 918 ASLRHLNISNDDATAAAGGLAGDRPDCGDERPSGSKPKVKVKTLSDYLAENKEALEQSE 976 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HDAC6 | NP_001259569.1 | HDAC10_HDAC6-dom1 | 119..457 | CDD:212526 | 60/361 (17%) |
HDAC6-dom2 | 538..895 | CDD:212527 | 152/381 (40%) | ||
zf-UBP | 1007..1069 | CDD:280334 | |||
Hdac7 | XP_008764065.1 | Arginase_HDAC | 544..919 | CDD:302587 | 151/383 (39%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1484694at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100220 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |