Sequence 1: | NP_001259569.1 | Gene: | HDAC6 / 32461 | FlyBaseID: | FBgn0026428 | Length: | 1179 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_445899.1 | Gene: | Hdac2 / 84577 | RGDID: | 619976 | Length: | 488 | Species: | Rattus norvegicus |
Alignment Length: | 474 | Identity: | 116/474 - (24%) |
---|---|---|---|
Similarity: | 197/474 - (41%) | Gaps: | 57/474 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 533 KVCYAYDAQMLLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAH 597
Fly 598 VNTVRRLLGREPKELHDAAGIYNSVYLHPRTFD-----CATLAAGLVLQAVDSVLRGESRSGICN 657
Fly 658 VRPPGHHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYIS 722
Fly 723 LHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLV 787
Fly 788 LVSAGFDAAIGDPLGGCKVTAEGYG-----MLTHWLSALASGRIIVCLEGGYNVNSISYAMTMCT 847
Fly 848 KTLLGDPVPT------------PQLGATALQKPPTVAFQSCVESLQQCLQVQRNHWRSLEFVG-- 898
Fly 899 --RRLPRDPVVGENNNED--------FLTASLRHLNISNDDATAAAGGLAGDRPDCGDERPSGSK 953
Fly 954 PKVK--VKTLSDYLAENKE 970 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HDAC6 | NP_001259569.1 | HDAC10_HDAC6-dom1 | 119..457 | CDD:212526 | |
HDAC6-dom2 | 538..895 | CDD:212527 | 95/378 (25%) | ||
zf-UBP | 1007..1069 | CDD:280334 | |||
Hdac2 | NP_445899.1 | PTZ00063 | 9..398 | CDD:240251 | 103/406 (25%) |
HDAC2 | 9..374 | CDD:212535 | 99/382 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0123 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |